Gene PP_5299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5299 
Symbol 
ID1042223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6046106 
End bp6047488 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content62% 
IMG OID637148698 
Productglutamine synthetase, putative 
Protein accessionNP_747400 
Protein GI26991975 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.802661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.238566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGG TAACCCCGTG CGCCAGTTCT TCCAGCGAGA TGAATGACTT CCTCCAGGCC 
CATCCGGACA CGCAGTACGT AGACCTGCTG ATCTCCGACA TGAATGGCGT GGTACGTGGC
AAGCGCATCG AGCGGGCCAG CCTGCACAAG GTGTACGAGA AGGGCATCAA CCTGCCCGCA
TCGCTGTTCG CCCTTGATAT CAACGGTTCC ACTGTCGAAA GCACCGGCCT TGGCCTGGAC
ATCGGCGACG CCGACCGCAT CTGTTTCCCG ATCCCCGGCA CGCTGTCGGA CGAGCCGTGG
CAAAAGCGCC CCACCGCCCA GCTGCTGATG ACCATGCACG AGCTGGATGG CCAGCCGTTC
TTCGCCGACC CGCGTGAAGT GCTGCGCCAG GTGGTGAGCA AGTTCGACGA CCTGGGCCTG
ACTATCTGCG CCGCGTTCGA GCTGGAGTTC TACCTGATCG ACCAGGACAA CCTCAACGGC
CGCCCGCAGC CGCCGCGCTC GCCGATCTCC GGCAAGCGCC CGCAGTCGAC CCAGGTGTAC
CTGATCGACG ACCTCGACGA GTACGCCGAC TGCTTGCAGG ACATGCTCGA AGCAGCCAAG
GAACAGGGCC TGCCTGCCGA CGCCATCGTC AAGGAAAGCG CCCCGGCGCA GTTCGAGGTC
AACTTGCACC ACGTGGCGGA TCCGCTGAAG GCCTGCGACT ATGCGATCCT GCTCAAGCGC
CTGATCAAGA ACGTCGCCTA CGACCATGAA ATGGACACCA CCTTCATGGC CAAGCCCTAC
CCGGGCCAGG CAGGCAACGG TCTGCATGTG CACATTTCAT TGCTGGACAA GAAAACCGGC
AAGAACATCT TCGCCAGTGA CGATCCGCTG CAAAGCGATA CGCTGCGCCA CGCCATTGGT
GGCGTGCTGG AAACCATGCC GGCGTCGATG GCCTTCCTGT GCCCCAACAT CAACTCCTAC
CGCCGCTTCG GTGCGCAGTT CTACGTTCCC AATGCGCCGA GCTGGGGCCT GGACAACCGC
ACCGTGGCCG TACGCGTGCC CACCGACAGC AGCGAAAACG TGCGCCTTGA GCACCGTGTA
GCCGGCGCCG ATGCCAACCC GTACCTGATG CTCGCGGCGA TCCTTGCCGG CGTTCACCAT
GGCCTGACCA ACAAGGTCGA GCCCGAGGCG CCGATCGAAG GCAACTCCTA CGAGCAGCTG
GAGCAAAGCC TGCCGAACAA CCTGCGCGAT GCCCTGCGCG CGCTGGATGA CAGCGAAGTC
CTCAACCAAT ACATCAGCCC GGACTACATC GATATCTTCG TGGCCTGCAA GGAAAGCGAA
CTGGCCGAGT TCGAAGTGTC GATTTCCGAT CTTGAGTACA ACTGGTACCT GCACACGGTG
TAA
 
Protein sequence
MTSVTPCASS SSEMNDFLQA HPDTQYVDLL ISDMNGVVRG KRIERASLHK VYEKGINLPA 
SLFALDINGS TVESTGLGLD IGDADRICFP IPGTLSDEPW QKRPTAQLLM TMHELDGQPF
FADPREVLRQ VVSKFDDLGL TICAAFELEF YLIDQDNLNG RPQPPRSPIS GKRPQSTQVY
LIDDLDEYAD CLQDMLEAAK EQGLPADAIV KESAPAQFEV NLHHVADPLK ACDYAILLKR
LIKNVAYDHE MDTTFMAKPY PGQAGNGLHV HISLLDKKTG KNIFASDDPL QSDTLRHAIG
GVLETMPASM AFLCPNINSY RRFGAQFYVP NAPSWGLDNR TVAVRVPTDS SENVRLEHRV
AGADANPYLM LAAILAGVHH GLTNKVEPEA PIEGNSYEQL EQSLPNNLRD ALRALDDSEV
LNQYISPDYI DIFVACKESE LAEFEVSISD LEYNWYLHTV