Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5137 |
Symbol | |
ID | 1041650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5861721 |
End bp | 5862779 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148536 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_747238 |
Protein GI | 26991813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACA CCACCCCCGG CGCACAGATT AAAGTGCGCA ACATCCACAA GCGCTTCGGT GCCTTTACGG CGCTCAACGA TGTCTCTCTG GACATCGCCG CGGGCGAACT GGTGTGCCTG CTCGGCCCAT CCGGCTGTGG CAAGACCACG CTGCTGCGTT GCATTGCCGG CCTGGAGCGC CAGGATCGCG GTACGCTGTA CATCGGCGAA CGCGATATCT CCGATCTGTC CCCCCAGGCG CGGGACTACG GCATCCTGTT CCAGTCCTAC GCGCTGTTTC CCAACCTTAC CGTCGAAGCC AATATCGCCT ATGGCCTGAC GGGCAGTGGT CGCGAGCAGG CCCGCCAGCG GGTTGCCGAA ATGCTCGAAC TGGTAGGCCT GTCTGGCAGC GAGAAGAAGT ACCCAGGCCA GCTCTCCGGT GGCCAGCAGC AACGTGTGGC CCTGGCCCGC GCGCTGGCAC CGTCGCCATC GCTGCTGCTG CTCGATGAGC CGATGTCGGC GCTGGACGCC CGGGTGCGCG AGCACTTGTG CACCGAACTG CGTCAGCTGC AGCGCCAACT GGGCATCACC ACGTTGATGG TTACCCACAA CCAGGACGAG GCCATGTTGA TGGCCGACCG CATCGCGGTG ATGAACAACG GCCAGGTCGA GCAGTACGCC ACCCCGCAGG AAATCTATGA CCACCCGGCC ACGCCGTTCG TGGCCGAGTT CGTCGGCCAG GGCAACTGGC TGCCGTTCCA GCGCAGCAGC GACAGCCATG CCCTGGTCGG CGACATGAAC ATGCGCCTGG CGCCGGGTTC AGCCCAGGCC AGCAGTGGCC GGCTGTTCTG CCGCCCGGAA GCGATCACGG TCAACCCGGT GGTGCACGAA GAAAATCTGT TCCCGGCCAT GGTCCGCGAA ATCACCTTCC TCGGTAACCG CTGCCGCATG AGCTTTGAAC TCAAGGCCCT GCCAGGCCAT GCCCTGCTGG CCGAGCTGGC CCCTGAGGCC ATGCCGCGCC TGGGCTCGCA GGACATCTGG GTGGCGTTGC CGCCGCAGAG CCTGCAGGTG TTTGCCTGA
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Protein sequence | MNHTTPGAQI KVRNIHKRFG AFTALNDVSL DIAAGELVCL LGPSGCGKTT LLRCIAGLER QDRGTLYIGE RDISDLSPQA RDYGILFQSY ALFPNLTVEA NIAYGLTGSG REQARQRVAE MLELVGLSGS EKKYPGQLSG GQQQRVALAR ALAPSPSLLL LDEPMSALDA RVREHLCTEL RQLQRQLGIT TLMVTHNQDE AMLMADRIAV MNNGQVEQYA TPQEIYDHPA TPFVAEFVGQ GNWLPFQRSS DSHALVGDMN MRLAPGSAQA SSGRLFCRPE AITVNPVVHE ENLFPAMVRE ITFLGNRCRM SFELKALPGH ALLAELAPEA MPRLGSQDIW VALPPQSLQV FA
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