Gene PP_5137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5137 
Symbol 
ID1041650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5861721 
End bp5862779 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID637148536 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_747238 
Protein GI26991813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA CCACCCCCGG CGCACAGATT AAAGTGCGCA ACATCCACAA GCGCTTCGGT 
GCCTTTACGG CGCTCAACGA TGTCTCTCTG GACATCGCCG CGGGCGAACT GGTGTGCCTG
CTCGGCCCAT CCGGCTGTGG CAAGACCACG CTGCTGCGTT GCATTGCCGG CCTGGAGCGC
CAGGATCGCG GTACGCTGTA CATCGGCGAA CGCGATATCT CCGATCTGTC CCCCCAGGCG
CGGGACTACG GCATCCTGTT CCAGTCCTAC GCGCTGTTTC CCAACCTTAC CGTCGAAGCC
AATATCGCCT ATGGCCTGAC GGGCAGTGGT CGCGAGCAGG CCCGCCAGCG GGTTGCCGAA
ATGCTCGAAC TGGTAGGCCT GTCTGGCAGC GAGAAGAAGT ACCCAGGCCA GCTCTCCGGT
GGCCAGCAGC AACGTGTGGC CCTGGCCCGC GCGCTGGCAC CGTCGCCATC GCTGCTGCTG
CTCGATGAGC CGATGTCGGC GCTGGACGCC CGGGTGCGCG AGCACTTGTG CACCGAACTG
CGTCAGCTGC AGCGCCAACT GGGCATCACC ACGTTGATGG TTACCCACAA CCAGGACGAG
GCCATGTTGA TGGCCGACCG CATCGCGGTG ATGAACAACG GCCAGGTCGA GCAGTACGCC
ACCCCGCAGG AAATCTATGA CCACCCGGCC ACGCCGTTCG TGGCCGAGTT CGTCGGCCAG
GGCAACTGGC TGCCGTTCCA GCGCAGCAGC GACAGCCATG CCCTGGTCGG CGACATGAAC
ATGCGCCTGG CGCCGGGTTC AGCCCAGGCC AGCAGTGGCC GGCTGTTCTG CCGCCCGGAA
GCGATCACGG TCAACCCGGT GGTGCACGAA GAAAATCTGT TCCCGGCCAT GGTCCGCGAA
ATCACCTTCC TCGGTAACCG CTGCCGCATG AGCTTTGAAC TCAAGGCCCT GCCAGGCCAT
GCCCTGCTGG CCGAGCTGGC CCCTGAGGCC ATGCCGCGCC TGGGCTCGCA GGACATCTGG
GTGGCGTTGC CGCCGCAGAG CCTGCAGGTG TTTGCCTGA
 
Protein sequence
MNHTTPGAQI KVRNIHKRFG AFTALNDVSL DIAAGELVCL LGPSGCGKTT LLRCIAGLER 
QDRGTLYIGE RDISDLSPQA RDYGILFQSY ALFPNLTVEA NIAYGLTGSG REQARQRVAE
MLELVGLSGS EKKYPGQLSG GQQQRVALAR ALAPSPSLLL LDEPMSALDA RVREHLCTEL
RQLQRQLGIT TLMVTHNQDE AMLMADRIAV MNNGQVEQYA TPQEIYDHPA TPFVAEFVGQ
GNWLPFQRSS DSHALVGDMN MRLAPGSAQA SSGRLFCRPE AITVNPVVHE ENLFPAMVRE
ITFLGNRCRM SFELKALPGH ALLAELAPEA MPRLGSQDIW VALPPQSLQV FA