Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4972 |
Symbol | |
ID | 1041628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5664451 |
End bp | 5664837 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148373 |
Product | hypothetical protein |
Protein accession | NP_747075 |
Protein GI | 26991650 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.567754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTG CCCTGTGGTG CATCCTGATT GCGCTGCTGT TGAACCCGCT TTGTGCCTTG ATCGCCAAGG CGAGCAGTGG CCGCTTCGGC CTCAAGGACA ATCACGATCC GCGAGCCTTC CTCGATACCT TGTCGGGCCT GCCGCGGCGT GCTCATGCAG CGCAGCAGAA TGGCTACGAA GCGTTTCCGG CATTTGCTGC GGCGGTGCTT GTGGCGGATA TCGTGGGCAA TGCCGAGCAG GTGACCCAGG ATGTGCTGGG GGTGATGTAT ATCACCAGCC GCTTGCTTTA CATCATCTGC TACCTGGCCG ACTGGGCTGC CTTGCGGTCG CTGGTGTGGT TTGCCAGCCT GGCACTGATC GTGTCGTTCT TCGTGGTTTC CATCTGA
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Protein sequence | MTVALWCILI ALLLNPLCAL IAKASSGRFG LKDNHDPRAF LDTLSGLPRR AHAAQQNGYE AFPAFAAAVL VADIVGNAEQ VTQDVLGVMY ITSRLLYIIC YLADWAALRS LVWFASLALI VSFFVVSI
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