Gene PP_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4942 
Symbol 
ID1041964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5623729 
End bp5624625 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID637148343 
ProductMig-14 family protein 
Protein accessionNP_747045 
Protein GI26991620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATC GTATCCAGGC CTTCCGCGAA CGCGGTTGGC AAGCTATCGA TGCCAAGGCT 
TATGCCCAGG CGTGGGCGCG CTTTGGCGGC AGTGTTGCCA CCCATCCGCT GGTGGTCGAG
CAACTGGCGG ACCTGGCACA GATCCCGGTG CGTTACCTGG GCTGGCACCA GGCTGGCGAG
CTGCAAGCCG CCATCCCGGC CTGGGGGCGT CACCTGGCGC TGTCCAAGGA CGTGCTGAAG
CGTGCTGGCA AGAAGGCCCT GTTCGACCTC GGTAATGCCG AGATCATTCT GCCGGCGGCG
TCTGATGCCG CTGCGCCGTT GCGCCATACA ATGCGTTACC TGTCCGAACT GAACCAGGGC
CGCTTCAGCG GTCTCAAGGC GCAGAAGGAG CAGTTGGCCA TGGCCCGGGC GCCTGAAGAC
CTGTCGAAGA AGTTCCGCTA CAACCAGCGC CGTGAACTGC GCCTGCTGGA AGAGGCGGGT
GGTGTGGTAC GCCCGATCAG CGACTTCAGT GCCCAGGAAA TCGCCAGCAT GTATTGCGAC
CTGTTCCTGC GCCGCTGGGG GTTCCCGGCC ACCGGTGCCG AGCGTATGGC CGATGTGTTG
GAGCGCCTGC GTGAGCTGCT GATCGGCTCG GTGTTGCTGC TGGACGGTAA GCCGATTGCC
ATCCAGCTGG TGTACCGCGT CGAAGCGCCG GAGTGGATCA GCGTCGAGTA CATCAATGGC
GGCGTCGACC CTGAAACCAA GGCCTTCAGC CCAGGCAGCG TGCTGAGCTT CCTCAATACC
CAGGCCGCCT GGGAAGACGC CCGGTCACGC AACAAGCCGC TGCGGTTCTC GTTCGGCCGT
GCTGACCGTG AGTATAAGGA CCGCTGGTGC AACCCTGTGC CGGTGTATCA AGCGTGA
 
Protein sequence
MLNRIQAFRE RGWQAIDAKA YAQAWARFGG SVATHPLVVE QLADLAQIPV RYLGWHQAGE 
LQAAIPAWGR HLALSKDVLK RAGKKALFDL GNAEIILPAA SDAAAPLRHT MRYLSELNQG
RFSGLKAQKE QLAMARAPED LSKKFRYNQR RELRLLEEAG GVVRPISDFS AQEIASMYCD
LFLRRWGFPA TGAERMADVL ERLRELLIGS VLLLDGKPIA IQLVYRVEAP EWISVEYING
GVDPETKAFS PGSVLSFLNT QAAWEDARSR NKPLRFSFGR ADREYKDRWC NPVPVYQA