Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4940 |
Symbol | |
ID | 1042446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5621324 |
End bp | 5622280 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148341 |
Product | hypothetical protein |
Protein accession | NP_747043 |
Protein GI | 26991618 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTCC TATTTCTGGT GCAGAAGGAA CAGCGGGCGA TTCTTGACCG CCTGTACGAT GGCGTCGCGG CCAACTGCGA GTGCGACCTG CGCTGGCTGA CCAGCCAGGA TCAGCGCAAC CTGCGCCGTT ACTTCAAGCG TGAGGTGCAA GTCGAGCGCT ATGACCGCAT CGTGTTCTTC CTGCGTTTCA AGCAGGAGAT CCGCCAGGTG GCCTTCATCC GCACTGTGCC GAACCTGGTG ATTCTCGAGC ACGACGCCTA CCAGAACTAC ATCCCGTGCA AGTACACCGG CAAGTTCAGC GCTCATTACC GCCAGTTGCC ATGGGCGCGG GTGATCAGCT CCGGCTACAT GGTCAGCGAG CGCTTGCGCC AGGAAGGTTT CGACGCGGTG TTCGTGCCCA AGGGCTATGA CGAGCAGTTG CTGGCCGACC AAGGGCGTGA GCGTGATATC GAACTGGCCT TTGTCGGCAG CGTCAACAGT GTGGCCTACA GCGGCCGCAA GGCACTGCTG GACGAGTTGG GGCAGGTCGA GAACCTGTTG GTAACCCGTA CCAAGTCGGG CGAGGACTAC TGCAACACGC TTAACCGTAT TCGTTTCTTC GTCAGTGCCG ATGTCGGCAT GGGCGAATAC ATGATCAAGA ACTTCGAAGC CATGGCCTGT GGCTGTGTGT TGCTGGCATA CGACCAAGGC GAGGAAGAGA ACCGTGCGCT GGGTCTGCAA GACATGCACA ACGTGGTGTT CTATGACAAC ATCCCGACCC TTCAGGAAAA GCTCCGTCGT TTGCGCGCGA ACCCCGAGCT AGCCCGGCAG ATTGCAGAAA ATGGCCGCCA TCTGGCGGTT TCCCGTTTTA GTTTCGGCGC AGTTGGACGT AGCATCGTCG ACCACATGCG CCCGGCGCTC AGGCCCCACC CGCCATTGTC TGCATGGCAG CGGCTGCGTC TGAAGCTGGG CATCTAA
|
Protein sequence | MKVLFLVQKE QRAILDRLYD GVAANCECDL RWLTSQDQRN LRRYFKREVQ VERYDRIVFF LRFKQEIRQV AFIRTVPNLV ILEHDAYQNY IPCKYTGKFS AHYRQLPWAR VISSGYMVSE RLRQEGFDAV FVPKGYDEQL LADQGRERDI ELAFVGSVNS VAYSGRKALL DELGQVENLL VTRTKSGEDY CNTLNRIRFF VSADVGMGEY MIKNFEAMAC GCVLLAYDQG EEENRALGLQ DMHNVVFYDN IPTLQEKLRR LRANPELARQ IAENGRHLAV SRFSFGAVGR SIVDHMRPAL RPHPPLSAWQ RLRLKLGI
|
| |