Gene PP_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4940 
Symbol 
ID1042446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5621324 
End bp5622280 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID637148341 
Producthypothetical protein 
Protein accessionNP_747043 
Protein GI26991618 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC TATTTCTGGT GCAGAAGGAA CAGCGGGCGA TTCTTGACCG CCTGTACGAT 
GGCGTCGCGG CCAACTGCGA GTGCGACCTG CGCTGGCTGA CCAGCCAGGA TCAGCGCAAC
CTGCGCCGTT ACTTCAAGCG TGAGGTGCAA GTCGAGCGCT ATGACCGCAT CGTGTTCTTC
CTGCGTTTCA AGCAGGAGAT CCGCCAGGTG GCCTTCATCC GCACTGTGCC GAACCTGGTG
ATTCTCGAGC ACGACGCCTA CCAGAACTAC ATCCCGTGCA AGTACACCGG CAAGTTCAGC
GCTCATTACC GCCAGTTGCC ATGGGCGCGG GTGATCAGCT CCGGCTACAT GGTCAGCGAG
CGCTTGCGCC AGGAAGGTTT CGACGCGGTG TTCGTGCCCA AGGGCTATGA CGAGCAGTTG
CTGGCCGACC AAGGGCGTGA GCGTGATATC GAACTGGCCT TTGTCGGCAG CGTCAACAGT
GTGGCCTACA GCGGCCGCAA GGCACTGCTG GACGAGTTGG GGCAGGTCGA GAACCTGTTG
GTAACCCGTA CCAAGTCGGG CGAGGACTAC TGCAACACGC TTAACCGTAT TCGTTTCTTC
GTCAGTGCCG ATGTCGGCAT GGGCGAATAC ATGATCAAGA ACTTCGAAGC CATGGCCTGT
GGCTGTGTGT TGCTGGCATA CGACCAAGGC GAGGAAGAGA ACCGTGCGCT GGGTCTGCAA
GACATGCACA ACGTGGTGTT CTATGACAAC ATCCCGACCC TTCAGGAAAA GCTCCGTCGT
TTGCGCGCGA ACCCCGAGCT AGCCCGGCAG ATTGCAGAAA ATGGCCGCCA TCTGGCGGTT
TCCCGTTTTA GTTTCGGCGC AGTTGGACGT AGCATCGTCG ACCACATGCG CCCGGCGCTC
AGGCCCCACC CGCCATTGTC TGCATGGCAG CGGCTGCGTC TGAAGCTGGG CATCTAA
 
Protein sequence
MKVLFLVQKE QRAILDRLYD GVAANCECDL RWLTSQDQRN LRRYFKREVQ VERYDRIVFF 
LRFKQEIRQV AFIRTVPNLV ILEHDAYQNY IPCKYTGKFS AHYRQLPWAR VISSGYMVSE
RLRQEGFDAV FVPKGYDEQL LADQGRERDI ELAFVGSVNS VAYSGRKALL DELGQVENLL
VTRTKSGEDY CNTLNRIRFF VSADVGMGEY MIKNFEAMAC GCVLLAYDQG EEENRALGLQ
DMHNVVFYDN IPTLQEKLRR LRANPELARQ IAENGRHLAV SRFSFGAVGR SIVDHMRPAL
RPHPPLSAWQ RLRLKLGI