Gene PP_4776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4776 
Symbol 
ID1042959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5437952 
End bp5438428 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID637148178 
ProductAsnC family transcriptional regulator 
Protein accessionNP_746882 
Protein GI26991457 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.524712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00402147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAAC TTGACCGCTA CGACCTGAGC ATCCTCGCCG AATTGCAGCG CGATGCGCGC 
ATTTCCAACC AGGAACTGGC CGAACGCATC GGCCTGTCGC CATCGCCATG CTCGCGTCGG
GTCAAGCAAC TGGAGGACGA CGGCTATATC TCGCGCCAGG TGGCCCTGCT CGACCGCAAG
AAGCTGGGCC TGAGCCTGAC CGCCTATGTG TTGATAGGTA TGGACCGCCA CACCCCGGAG
CGCTTTGAAA CATTCGAGGC CGCCATCCGC AACCTGCCAC AGGTGCTCGA GTGCAGCCTG
GTCACCGGCA TGGATGCCGA CTATCAGTTG AAAGTGGTGG TGCCGGACAT GGACCACTAC
CAGAAACTGC TTCTAGGCAG CCTGACCCGT ATCGAAGGCG TCACCAGCGT GCGCTCGAGC
TTCGTGCTCA ACCAGGTGTT GGCCAGCACC GAGCTGCCAT TGACCCACCT GCGTTAA
 
Protein sequence
MSKLDRYDLS ILAELQRDAR ISNQELAERI GLSPSPCSRR VKQLEDDGYI SRQVALLDRK 
KLGLSLTAYV LIGMDRHTPE RFETFEAAIR NLPQVLECSL VTGMDADYQL KVVVPDMDHY
QKLLLGSLTR IEGVTSVRSS FVLNQVLAST ELPLTHLR