Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4765 |
Symbol | |
ID | 1046073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5425463 |
End bp | 5426701 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148167 |
Product | hypothetical protein |
Protein accession | NP_746871 |
Protein GI | 26991446 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0079112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00101931 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCCCGATC TGACCCCCGC ATCCCCTCCC CCCGCTGTCG TCATCGGTGG CGGCCCCGCC GGCCTGATGG CTGCCGAAGC ACTGGCCAAG GCAGGCCTGG CGGTCGAGGT GTTCGATGCC ATGCCTTCAG TGGGCCGCAA GTTCCTGCTG GCGGGTGTCG GCGGCATGAA CATCACCCAT TCCGAGCCCT ACCCGGCGTT CGTGGCACGC TATGCCGAAC GCCAAGGCGA AATCGAGGCC CTGCTACGCG ACTTCGATGC GGACGCGTTG CGCCAGTGGA TTCATGGTTT GGGCATCGAA ACCTTCGTCG GCACCTCGGG CCGGGTGTTC CCCACCGACA TGAAAGCCGC ACCGTTGCTG CGTGCCTGGC TCAAGCGCCT GCGCGACAAC GGGGTAGTTA TCCACACCCG CCATCGCTGG TTGGGCTGGA ACACCGATGG CAGCTTGCGC ATTGCTTATC CACAGGGCGA GCGTCAGGTG AAAGCCTCGG TCGTGGTGCT GGCGCTGGGT GGTGCCAGCT GGGCGCGCCT GGGTTCTGAC GGCAGCTGGC AACCGCTGCT GGCAGAACGG GCTGTGGATA TCTCGCCTTT GCAGCCGAGC AACTGCGGTT TTGAAGTAGC GGGCTGGAGC GCGCTACTCA AGGACAAGTT CGCGGGCGCA CCGCTGAAGA ACATCGCCCT CAGCGTCCCG GGCAGCGCAC CGCGCAAGGG CGAGTTCATT CTCACCGCTC AAGGCGTGGA AGGCAGCCTG GTGTATGCCT GGTCGGCACC GGTCCGCGAG GCCATTCACC GTGAAGGCCG CGGGGTGTTG TTGCTCGACC TGCTGCCGGA CAAGCCTGTG GACAAGATTG CCCAGGCATT GGCCAAACCA CGCGGTTCAC GCTCCATGGC CAAGCACCTG CACAGCCAGC TGGGGATTGA TGGGGTCAAG GCCGCACTGC TGCGCGAACT GACCGATCAG GCGACCTTTG CCGACGTTGA TGCTTTGGCC CGGGCCATCA AGGCATTGCC CATCACCCTG GTACGCACGC GGCCGCTGGA TGAAGCGATC AGCAGTGCCG GCGGGGTCCG CTTCGAGGGC CTGGATGAGG GGTTGATGGT CAAGGGCATG CCGGGGGTGT TCTGTGCCGG CGAGATGCTG GACTGGGAGG CGCCGACCGG GGGGTATCTG CTCACGGCGT GCTTTGCCAG CGGCTTGCGC GCCGGACGGG CAGCGGCGGA TTGGGTGCAG GCTTCCTGA
|
Protein sequence | MPDLTPASPP PAVVIGGGPA GLMAAEALAK AGLAVEVFDA MPSVGRKFLL AGVGGMNITH SEPYPAFVAR YAERQGEIEA LLRDFDADAL RQWIHGLGIE TFVGTSGRVF PTDMKAAPLL RAWLKRLRDN GVVIHTRHRW LGWNTDGSLR IAYPQGERQV KASVVVLALG GASWARLGSD GSWQPLLAER AVDISPLQPS NCGFEVAGWS ALLKDKFAGA PLKNIALSVP GSAPRKGEFI LTAQGVEGSL VYAWSAPVRE AIHREGRGVL LLDLLPDKPV DKIAQALAKP RGSRSMAKHL HSQLGIDGVK AALLRELTDQ ATFADVDALA RAIKALPITL VRTRPLDEAI SSAGGVRFEG LDEGLMVKGM PGVFCAGEML DWEAPTGGYL LTACFASGLR AGRAAADWVQ AS
|
| |