| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4761 |
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| Symbol | |
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| ID | 1042571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5421261 |
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| End bp | 5421851 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637148163 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_746867 |
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| Protein GI | 26991442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000261111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00232434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGG GCGAGGTGCG CAACTGGGTG TTCGACATGG ACGGCACCCT GACCGTGGCC
GTGCACGACT TCGCCGCCAT TCGGGTGGCG CTGGACATCC CGGCCGAACA CGACATCCTC
ACCCACCTGG CGGCCTTGCC GGCAGAGGAA GCGGCGGCCA AGCATGCCTG GTTGCTGGAG
CACGAAAGGG ACCTGGCAAC GGCCTCCACG GCGGCCACCG GGGCGGTGGA ACTGGTGCGA
GAGTTGGCCG GGCGCGGGTG CCGGCTGGGT ATTCTGACCC GCAATGCGCG TGAGCTGGCG
CATGTAACGC TGGAGGCCAT CGGCCTGGCG GACTGCTTCC CGGTGGAACA CATTCTCGGG
CGTGACGAGG CTGCACCCAA GCCGAGCCCG GATGGGCTGC TGAAGATTGC CAGCGCCTGG
GGCGTGACGC CGAGCGAACT GGTGATGGTG GGGGATTACC GCTTTGACCT GGACTGCGGG
CGGGCGGCGG GGGCGCGCAC GGTGCTGGTG AACCTGCCGG ACAACCCCTG GCCAGAGCTG
GTGGATTGGC ATGCGGCGGA TTGCCGGGCG TTGAAGGTGA TGCTGGGCTG A
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| Protein sequence | MSLGEVRNWV FDMDGTLTVA VHDFAAIRVA LDIPAEHDIL THLAALPAEE AAAKHAWLLE
HERDLATAST AATGAVELVR ELAGRGCRLG ILTRNARELA HVTLEAIGLA DCFPVEHILG
RDEAAPKPSP DGLLKIASAW GVTPSELVMV GDYRFDLDCG RAAGARTVLV NLPDNPWPEL
VDWHAADCRA LKVMLG
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