| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4708 |
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| Symbol | pnp |
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| ID | 1045958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5352009 |
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| End bp | 5354114 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637148111 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | NP_746817 |
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| Protein GI | 26991392 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0102803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TAATCAAGAC TTTCCAGTTC GGTCAATCGA CCGTCACTCT CGAAACGGGC
CGTATTGCCC GTCAGGCAAC CGGCGCCGTG CTGGTTACCG TCGACAACGA CGTCACCGTG
CTGGTGACTG TGGTAGGCGC CAAACAGGCT GATCCAGGCA AGGGTTTCTT CCCGCTGTCG
GTTCACTACC AGGAAAAGAC CTACGCCGCT GGCAAGATCC CAGGTGGCTT CTTCAAGCGT
GAAGGCCGTC CTTCCGAGAA AGAGACGCTG ACCTCGCGCC TGATCGACCG TCCGATCCGT
CCGCTGTTCC CGGAAGGCTT CATGAACGAA GTGCAGGTCG TCTGCACCGT GGTTTCCACC
AGCAAGAAGA CCGACCCGGA CATCGCTGCG ATGATCGGTA CCTCGGCTGC CCTGGCCATT
TCCGGCATTC CGTTCGAAGG CCCGATCGGC GCTGCCCGCG TTGCCTTCCA CGAAAGCACT
GGCTACCTGC TGAACCCGAC CTATGAGCAA CTGGCTGCCT CGAGCCTGGA CATGGTCGTT
GCCGGTACCT CCGACGCTGT ACTGATGGTT GAATCGGAAG CTCAAGAGCT GACCGAAGAC
CAGATGCTGG GTGCCGTACT GTTCGCCCAC GACGAATTCC AGGCTGTTAT CCAGGCTGTC
AAAGAGCTGG CTGCCGAAGC TGGCAAGCCG ACTTGGGACT GGAAACCTGC CGTTGCCAAC
ACCGAGCTGT TCAATGCTAT CCGCGCCGAG TTCGGCGAAG CGGTTTCGCA GGGTTACACC
ATCACCGTCA AAGCCGACCG CTACGCGCGT CTGGGTGAGC TGCGTGACCA GGCGGTTGCC
AAGTTCTCCG GTGAAGAAGG CCAGCCTTCG GCTTCCGAAG TAAAAGAGAT CTTCGGCGAA
ATCGAATACC GCACCGTTCG CGAAAACATC GTCAACGGCA AGCCACGTAT CGACGGCCGC
GACAACAAGA CCGTACGCCC GCTGAACATC GAAGTGGGTG TGCTGCCAAA AACTCACGGT
TCGGCACTGT TCACCCGTGG CGAAACCCAG GCCCTGGTCG TTGCGACCCT GGGTACTGCC
CGTGATGCCC AGCTGCTGGA CACCCTCGAA GGCGAGAAGA AAGACCCCTT CATGCTGCAC
TACAACTTCC CACCGTTCTC GGTAGGTGAG TGTGGCCGCA TGGGCGGTGC TGGCCGTCGC
GAAATCGGCC ACGGCCGTCT GGCCCGCCGT TCGGTTCAGG CCATGCTGCC TGCTGCTGAC
GTGTTCCCGT ACACCATCCG CGTGGTTTCG GAAATCACCG AATCCAACGG TTCCAGCTCC
ATGGCTTCGG TCTGCGGTGC TTCCCTGGCC CTGATGGACG CCGGTGTGCC GATGAAGGCG
CCGGTTGCCG GTATCGCCAT GGGCCTGGTC AAGGAAGGCG ACAAGTTCGC AGTCCTGACT
GACATCCTGG GTGACGAAGA CCACCTGGGC GACATGGACT TCAAGGTAGC CGGTACCGCC
AAAGGCGTCA CCGCGCTGCA GATGGACATC AAGATCAACG GCATCACCGA AGAGATCATG
GAAATCGCCC TGGGCCAAGC CCTGGAAGCG CGCCTGAACA TCCTCGGCCA GATGAACCAG
GTTATTGGCC AGTCGCGTAC CGAACTGTCG GCCAACGCCC CGACCATGAT CGCGATGAAG
ATCGACACCG ACAAGATCCG TGACGTCATC GGTAAAGGCG GCGCCACCAT TCGCGCCATC
TGCGAAGAGA CCAAGGCTTC GATCGACATC GAAGACGACG GCTCGATCAA GATCTTCGGC
GAAACCAAGG AAGCGGCAGA TGCTGCCAAG CAGCGCATCC TGGGCATCAC CGCTGAGGCC
GAGATCGGCA AGATCTACGT CGGCAAGGTT GAGCGCATTG TCGACTTCGG CGCCTTCGTC
AACATCCTGC CTGGCAAGGA CGGTTTGGTG CACATCTCCA TGCTGAGCGA TGCTCGCGTC
GAGAAAGTCA CCGACATCCT CAAGGAAGGC CAGGAAGTTG AAGTGCTTGT ACTGGACGTG
GACAACCGCG GCCGTATCAA GCTGTCGATC AAAGACGTCC CTGCGGCCAA GGCCTCGGGC
GTCTAA
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| Protein sequence | MNPVIKTFQF GQSTVTLETG RIARQATGAV LVTVDNDVTV LVTVVGAKQA DPGKGFFPLS
VHYQEKTYAA GKIPGGFFKR EGRPSEKETL TSRLIDRPIR PLFPEGFMNE VQVVCTVVST
SKKTDPDIAA MIGTSAALAI SGIPFEGPIG AARVAFHEST GYLLNPTYEQ LAASSLDMVV
AGTSDAVLMV ESEAQELTED QMLGAVLFAH DEFQAVIQAV KELAAEAGKP TWDWKPAVAN
TELFNAIRAE FGEAVSQGYT ITVKADRYAR LGELRDQAVA KFSGEEGQPS ASEVKEIFGE
IEYRTVRENI VNGKPRIDGR DNKTVRPLNI EVGVLPKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GEKKDPFMLH YNFPPFSVGE CGRMGGAGRR EIGHGRLARR SVQAMLPAAD
VFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPMKA PVAGIAMGLV KEGDKFAVLT
DILGDEDHLG DMDFKVAGTA KGVTALQMDI KINGITEEIM EIALGQALEA RLNILGQMNQ
VIGQSRTELS ANAPTMIAMK IDTDKIRDVI GKGGATIRAI CEETKASIDI EDDGSIKIFG
ETKEAADAAK QRILGITAEA EIGKIYVGKV ERIVDFGAFV NILPGKDGLV HISMLSDARV
EKVTDILKEG QEVEVLVLDV DNRGRIKLSI KDVPAAKASG V
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