Gene PP_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4652 
Symbol 
ID1043346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5277038 
End bp5278258 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID637148050 
Productmajor facilitator superfamily MFS_1 
Protein accessionNP_746761 
Protein GI26991336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CCGCACCGCA GTTGTTGCGT CACCATCGTC CTTTTCTGGC CTTCTGGCTG 
GCCCGCGTGT TCACCGCCAG CGGCTTCCAG ATGCTCACCG TGGCCATCGG CTGGCACCTC
TACCAATTGA CCGGCAACGT CCTGGACCTG GGCCTGGTCG GCCTGGTCGA GTTCGCCCCA
CGGGTGCTGT TCATGCTGCA CACCGGCCAT GTCGCCGACC GCTATGACAG GCGCAAGGTC
GCCGCCTTGT GCCAGAGCCT CCAGGGGCTG ATTGCCCTGG CGCTGGCGGT GGGCAGTGCC
ACCGACAACG TCACCCGCGA ACTGATCTTT GCTCTGGCCT TCCTGCTCGG CGCCAGCCGC
TCATTCGAAA TGCCGGCAAC CCAGGCGCTG TTGCCCAATG TGGTACCGGC CGGGCTGTTC
CCGCGGGCAG TGGCGGCGTC GGCCTCGGCC ACCCAGTCGG CGACCATCGT GGCGCCGGCG
GTGGGCGGAT TCCTGTATGC CTTTGGCAGC ATGTGGGTGT ACGGCCCGAC GGTGGCCTTG
TACGCCATTG CCTGCGTGCT GACCCTGAGC CTGCAGGCGC GCGGCCAGGT CGCCCAGCGC
GGGCGCGCCA GCATCGAATC GCTGCTGGCT GGCATCCGCT TCATTCGCAG CCGGCCCGAC
ATCCTCGGCG CCATCTCGCT GGACCTGTTC GCCGTATTGT TGGGCGGAGC CACCGCCTTG
CTGCCGGTAT TTGCCAAGGA CATCCTGCTG ACCGGGCCGA TGGGCCTTGG CCTGTTGCGC
TCGGCGCCAG CGGTGGGAGC ATTGCTGATG TCGCTCTGGT TGGCGCGCTT CCCGTTCCAG
CGCAACGTCG GGCGGACGAT GTTCACTGCG GTCGGCGTGT TCGGCGTGGC GACCATCGCC
TTCGGCCTGT CGACCTCGTT CTGGTTCTCG CTGGCGGTAC TGGTGGTACT GGGTGCGGCA
GACATGATCA GCATGGTCAT TCGCAGTTCG TTCGTGCAGC TGGAGACACC GGATGAAATG
CGTGGGCGGG TCAGCGCAGT GAACGGCCTG TTCATCGGTG CCTCGAACCA GCTCGGTGAG
TTCGAATCGG GGGTGACCGC GCACTGGTTT GGTACAGTGC CGGCGGTGGT GCTGGGCGGG
GTGGGCACTT TGGTGGTGAC CGGGGTGTGG ATAAAACTGT TCCCTACCCT GGCCAAGCGG
GACCGGTTGC ATAACGGGTG A
 
Protein sequence
MSDSAPQLLR HHRPFLAFWL ARVFTASGFQ MLTVAIGWHL YQLTGNVLDL GLVGLVEFAP 
RVLFMLHTGH VADRYDRRKV AALCQSLQGL IALALAVGSA TDNVTRELIF ALAFLLGASR
SFEMPATQAL LPNVVPAGLF PRAVAASASA TQSATIVAPA VGGFLYAFGS MWVYGPTVAL
YAIACVLTLS LQARGQVAQR GRASIESLLA GIRFIRSRPD ILGAISLDLF AVLLGGATAL
LPVFAKDILL TGPMGLGLLR SAPAVGALLM SLWLARFPFQ RNVGRTMFTA VGVFGVATIA
FGLSTSFWFS LAVLVVLGAA DMISMVIRSS FVQLETPDEM RGRVSAVNGL FIGASNQLGE
FESGVTAHWF GTVPAVVLGG VGTLVVTGVW IKLFPTLAKR DRLHNG