| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4623 |
|---|
| Symbol | |
|---|
| ID | 1042664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5245356 |
|---|
| End bp | 5248658 |
|---|
| Gene Length | 3303 bp |
|---|
| Protein Length | 1100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637148021 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746732 |
|---|
| Protein GI | 26991307 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.258326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGTA AGCTTCCCTG CGCTATTGCC TTTATCATCC GTTCACTCTG CTGCTTCGGT
AATTTTGGAG CACAGTTCAT GTCTTTCGAT TTCAATTTTG GCACCCCCAA TCTCGGTGAG
GGGTGCCCAG ATCCACGCTC TGTGAAAGAA CAGGTGAAGG CCATGATGGC TCACGCCCAG
GAGCTGCAAC AACTGATGGC TACGGTTGCG CAACTGGGCA GCCTGATACC GGAGGCGCAT
CGACAACAGT TCACCGAGCA GAAGCGTTTA CCGTTGGCGG TTGTCGAGTC GCTTGTGCCG
CAAAGGCAGG CGGTGCTTGG CCAGTGGTGG GAGCAACAGT CCAGATTAAG TTTGAAACCA
CTTACTTTGG CGTCCCGTTT GATCCAGCTG ATGTTTGCCG AAACGCGCCT CAAGGCCCTT
ACGTTCAAGG CCTGGGAAGC CGGTATCGAG GCCCTCGAAC AGGACGGGGA CGCAAACAAG
CATGAGGTGT ACCTGGTTGC CGGAGATTTG CGTTTTCGTT TGCCGGGTGT CGTCGCCAGC
CGTCATGACC TCGAACAGAA CCCGGACGCA CCTGCGGATT TTCTGATCTA CAGCCTGGCC
AGCGGTTGCT GGTTCGACAC TGAACGCGCG CGCGCAGCCC GTGAACTCGC CCCTGCCTTT
GCTGAAGGCA GCCCGTTGCG TTGGCTGTTG TCTTCGCAAG AGCGGGCGGC GTTGTCTACG
GAGAGTTTGA CACTCGATTT CGTGCCGCTG CAGGTGCCAC TTCACAGGTA TTTCATCCGT
GATCTGCAGG CTATCCAGCT TGAAGCCACC CGGCGCAGCC TGCGGGTCAA GGTCGATGAC
GCCCGGCGTC TGGCCCAGCT CGACAGTGCG GCTCGGCTTG AGCCTCTGGT GGCTACGCTG
CAGAAACGTG CGACGCGGCA TGTGCGAGCG TACCGCACCA GCCTGCTGCC CGAATGGCGG
CGGTTCATGC AGGGCGAGGA ACTGCAAGCC TATCGACAGC TGGAAGATGA CCTGCAGGTG
AAGGAGAAGC GTTGCACCGA GCGTCTGGCG CAATGGCGCG ACCTGCGCAG CTTCGCCAAG
AAACAGGTCC AGCAAGCCCT TGGCCTGGAT ATCGACCCCG AGCAGGTACG ACTGCGTGTC
AGTCACGTCG ATGACCCTGA ACAGGCGATG AAACACACCC TGCTCGATTG GGCGCTGAGT
GGTGGCTACA GCGGGGGCCA GCTCAAGGTC GAAGTCCTGG GTGAGCGGCA CCGTTCCTTG
TTGGGGAGTA CCTCTATCCA GAGCGTGATC GAAAAACTGG ATTTGCGCGT GAACTACGTC
AAGCAGATCC GTACGCTCTA TGACGACACT TTGACCATGG CCGCACTGTG TGAGGTGCTT
GATGCACGGC TGGCGCTGGC CAATCAGGCC GCTCGTCATC AGGGTTTTCA CCCGGCGGCG
TTCGATCTGT TGCACCACGC ACGCCTGGGG AAAATGCAGG CCAATGTCAT CAGCGCCGGT
CTGGTTTGCC TCAATGGTGC GCAAACGCCC TTGAAGGATC TGCTGTGCCT GGTGCAGGAC
GATCAGTACC TGCTCTATGC CCCTGGGGCG CCGGGAGGCG ATTTTCATCT TTTCGACTCA
CTCGAAAAAA TGGCGCTCGA AATCGGTAGC TGGACCTTGT GGCCGGTAGG CAGTGAATAC
CTGCTGGGGC AATGCTCGCG GGCCCAGCAT GATTCGCTCA AGCGCCATTT GCGCAAGGTC
GAGCTGCTAC CCACTGACTG GTCCATGCAC AGCGTGACGC TCGCGCCGAT CAAGTCGCAG
CAGTGGCCGG ATGTGCTCAA AGCTCTGGCC AAGCGCAAGA TCCTTGCCCT GATCGAGGAT
CAACAGGCCA CCACGCCAAG CTGGTTCATC AAGGCCAGTC GTACCGAGCA GCAGGCACTG
GTTGATATCG ACCAACTGCT CAAGCTGGCG CAGGCCAGGT ATCAGTCGCT GATGAAGGTG
CCGAGCTTTC GCACCTTCGC CCATCGACAG GTGACGGAAA AGATCAATTC ATACCCGGGC
AATCGCGGCG GCCCAATCAA CCCGGATCAG GTATTGATAA CGCTGGAAGA GGATGCCATT
CGCACACTGA CACAGACTGT CATCAAAGGT TATCCCACGT ATTACAATTT CTCCGACTTT
GCCCGCATCA CCTCGGCTAT CGGCCAGGAT ATCTCGCACC TGAGCCCGGC GCTGCTAGGG
AGCTACATTC GTGCTGCCGA CCTGGGCAAC AAGTACATCG AAGAAGTGAA AGCGCAGTTA
CTCGACCGCT CCAGGCCGGA ATATGAAAGG CTCAGGCAGT GTTATCGCAC GCTCTTTGCT
TTGAAGATCA GGCGTGCCGT GCTCAGCGAG AAACTTCAGG GAAGCTTGTC GGGCCGCCAT
GCGCAGTGGC TGGAGTCGGT GAGCGACAGC TTTTCGGGGA CCTTGATCGA CGCGGCGTGC
AACCTTTATC CGTTGTGGAT GGACGATTGC CCCGTTCAAG GTGCCTACCT GCTGAAGCAT
GCTCGTGACC GCGAGCTTGA GCCCTTGGTC TATCTGCCAG AAATCGAGCA AGGCCCCACG
CTGCGGACCC TCAGCGAGCT GGCAAGGACT TGGCGTGAGC ACGACTTGGC AGGTTATTGC
CAAGACCGCG TGCCGTTATC GAGCCAGTCG CGCTTGAACG CATTGATCGA AGAGCAACTG
CGCGCCGGCG ATGGCATTGG GGTGGTGCTG GATGCCGTCG CCCGAGGCAG GGGCGTGCGG
CCGCCGATAG GGGAGACCGG GCGTATCGGG GATCCTGTCC AGGACCTGGA GAAACGTATC
AGGCGGATGA TCAACGAAGC CGCTGAAGAC AGCGCCGACG CTGCCGAGCG TATTTCGTCC
GTGGTGGTGG AGTGGGGGAT CGTACTGGCC GGCATCCTCA CCGTGCCGTT TCCGCCGGCG
GCCATGGCCG TCGGGCTGTT CTGTGCGGCC AGGTCCTTCA TCACCGGGGC CATCGCGTGG
AGCGATGGCG ACCGTTCCGC CGCCTTGCTG TCGTTCGCGG CGGGGGTTGC AGGAACGGTG
GCTTCCACGG GGGTCTTGGT GCGGCTGTTC GGTGCCGCAC AGAAATACAT CACCGTGCTT
TCCCGGGCAG AGGTGTCGCA GCCCACGGCA TTCTCGCGTG TGATCGGGCG GCTATGCGAT
GACTACGGGG ATCTGGTGAG TGAGGTGGCG CCCGCCCTTT ATGACGGCTT CTCTCAGGAA
CTGCTCTGGC TCGTCGAGGA GGAAACGCTA GACGTCGAAG CGCAGTGTGG GTTGCCCGCG
TAA
|
|---|
| Protein sequence | MLGKLPCAIA FIIRSLCCFG NFGAQFMSFD FNFGTPNLGE GCPDPRSVKE QVKAMMAHAQ
ELQQLMATVA QLGSLIPEAH RQQFTEQKRL PLAVVESLVP QRQAVLGQWW EQQSRLSLKP
LTLASRLIQL MFAETRLKAL TFKAWEAGIE ALEQDGDANK HEVYLVAGDL RFRLPGVVAS
RHDLEQNPDA PADFLIYSLA SGCWFDTERA RAARELAPAF AEGSPLRWLL SSQERAALST
ESLTLDFVPL QVPLHRYFIR DLQAIQLEAT RRSLRVKVDD ARRLAQLDSA ARLEPLVATL
QKRATRHVRA YRTSLLPEWR RFMQGEELQA YRQLEDDLQV KEKRCTERLA QWRDLRSFAK
KQVQQALGLD IDPEQVRLRV SHVDDPEQAM KHTLLDWALS GGYSGGQLKV EVLGERHRSL
LGSTSIQSVI EKLDLRVNYV KQIRTLYDDT LTMAALCEVL DARLALANQA ARHQGFHPAA
FDLLHHARLG KMQANVISAG LVCLNGAQTP LKDLLCLVQD DQYLLYAPGA PGGDFHLFDS
LEKMALEIGS WTLWPVGSEY LLGQCSRAQH DSLKRHLRKV ELLPTDWSMH SVTLAPIKSQ
QWPDVLKALA KRKILALIED QQATTPSWFI KASRTEQQAL VDIDQLLKLA QARYQSLMKV
PSFRTFAHRQ VTEKINSYPG NRGGPINPDQ VLITLEEDAI RTLTQTVIKG YPTYYNFSDF
ARITSAIGQD ISHLSPALLG SYIRAADLGN KYIEEVKAQL LDRSRPEYER LRQCYRTLFA
LKIRRAVLSE KLQGSLSGRH AQWLESVSDS FSGTLIDAAC NLYPLWMDDC PVQGAYLLKH
ARDRELEPLV YLPEIEQGPT LRTLSELART WREHDLAGYC QDRVPLSSQS RLNALIEEQL
RAGDGIGVVL DAVARGRGVR PPIGETGRIG DPVQDLEKRI RRMINEAAED SADAAERISS
VVVEWGIVLA GILTVPFPPA AMAVGLFCAA RSFITGAIAW SDGDRSAALL SFAAGVAGTV
ASTGVLVRLF GAAQKYITVL SRAEVSQPTA FSRVIGRLCD DYGDLVSEVA PALYDGFSQE
LLWLVEEETL DVEAQCGLPA
|
|---|
| |