Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4563 |
Symbol | |
ID | 1046345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5182895 |
End bp | 5183731 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637147961 |
Product | RNA binding S1 domain protein |
Protein accession | NP_746672 |
Protein GI | 26991247 |
COG category | [S] Function unknown |
COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTGC TTGGGCGTTA CAACAGTTTG CAAATCGTGA AACACGTGGA CTTCGGTCTG TACCTGGACG GCGGCGCCGA TGGCGAAATC CTGCTGCCCG GGCGCTACAT CCCGAAAAAC GCCGAGACCG AGGTCGATGA CTGGTTGAAC GTGTTCATCT ACCTGGACAG CGAAGACCAG CTGATCGCCA CCACCGAGAA GCCCAAGGTG CAGGTCGGCG AGTTCGCCAG CCTGAAGGTC AAGGACATCA ACGGTGCCGG TATCTTCCTG GACTGGGGCC TGTCCAAGGA CTTGCTGATG CCGTACTCGG AAGAGGCTCG GCCACTGAAG ATCGGTGATT ACTGCGTGGT GCACGTGTAC CTCGACAAGC GCACCCGCCG GATCACTGCC ACGTCGCGCC TGGACCGCTA CCTCGATGTC ACCCCGGCCG ACTACAAGGT TGGCCAGCCG GTCGAGCTGC TGGTGGCCGG CGAAACGCCG ATGGGCTTCA AGGCCATCAT CAACAACCGC CACTGGGGCC TGATCCACAA GAACGAGGTG TTCAAGTTCT TGCGCTCGGG CATGCACGAG AAGGGCTTCA TCAAGGAAGT GCGCCAGGAC GGCAAGATTT CACTGAGCCT GCAGCCGGTA GGCGCCGCCC TGGCGGACAC CCTGCAAGAG CAGATCATGG CGCGCCTGGA AGCCGAAGGC GGGGTGTTGG GGGTGTGCGA CAAGAGTGAC CCTGCGTTGA TCAGCAAGCT GTTCAACGTC AGCAAGGGCA ACTTCAAGAA GGCCATTGGC GGGTTGTTCA AGCAGGGCCT GATCGTCATC CATGACGATC GCATCGAGAA AGCCTGA
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Protein sequence | MALLGRYNSL QIVKHVDFGL YLDGGADGEI LLPGRYIPKN AETEVDDWLN VFIYLDSEDQ LIATTEKPKV QVGEFASLKV KDINGAGIFL DWGLSKDLLM PYSEEARPLK IGDYCVVHVY LDKRTRRITA TSRLDRYLDV TPADYKVGQP VELLVAGETP MGFKAIINNR HWGLIHKNEV FKFLRSGMHE KGFIKEVRQD GKISLSLQPV GAALADTLQE QIMARLEAEG GVLGVCDKSD PALISKLFNV SKGNFKKAIG GLFKQGLIVI HDDRIEKA
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