Gene PP_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4543 
Symbol 
ID1046062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5159841 
End bp5161052 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID637147941 
Producthypothetical protein 
Protein accessionNP_746652 
Protein GI26991227 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGACC CACCCGGCGT TCGTCATTTG AGCGACGGGC CTTCCTTGGG GATACTGACG 
GTCTTCAGAC AGCGAGCCGA AAACGTGACC AGCCTGTACA GCCTTGCCCA CCTGCGTGAT
CTTTCGACGG CCACCTGGGA TGCCCTTGTG CCAGCCGGCC AACCCTTCCT GCGCCATGCT
TTTCTCAGTG CAATGGAGGA CAGCGGCAGC GTGGCGCGCA ACACGGGCTG GGCCGCCGAG
CACCTGGTGC TGGAGCGTGA CGGACAGGTA CGGGCGCTGT TGCCCGCGTA CCGCAAGTGG
CACTCGTTTG GCGAGTATGT GTTCGATCAT GGTTGGGCCG ATGCTTGTGA GCGGGCCGGT
ATCGCCTACT ACCCAAAACT GCTTGGCGCT GTGCCGTTCA GCCCGGTCAG CGGCCCACGG
CTGCTGACGG CCGATCCGGC TGACGGTTTG TTGATGCTGC AGGCCCTGCC GGAGTATCTG
GGCAAGGGTG GGCTTTCCGG AGCGCACATC AACTTCACCG ACCCGGCGCT GGACGCGCAG
TTGGCGGGCC TGCCTGGGTG GATGGAACGC CTGGGCTGCC AGTTTCACTG GCAAAACCGG
GGGTATCGCG ACTTCCAGGA CTTTCTCGAC AGCCTCAGCT CGCGCAAGCG CAAGCAGATG
CGCAAGGAGC GCGAGCAGGT GGCGGGGCAG GGTATCGACT TCCGCTGGTA CCGCGGTGAT
GAACTGGACG AGGCACAGTG GGATTTCGTC TTTCTATGCT ATGCCAACAC CTATGCGGTG
CGTCGTCGTG CCCCCTACCT GACGCGCGAA TTTTTCAGTC TGCTGGCCGA GCGCATGCCC
GAGGCGGTGC GCGTGGTGAT GGCCCGCCAG GGTGGGCGTG ATGTGGCCAT GGCCTTGAGC
CTGGTGGGCG GCGACAGCCT GTTTGGCCGC TACTGGGGCT GCCTGGATGA GTTCGACCGG
CTGCATTTCG AGACGTGTTT CTACCAGGGC ATGGACTTTG CCATTGCCGA GGGTTACCAG
CGTTTCGATG CCGGGGCACA GGGCGAGCAC AAGTTGATAC GCGGGTTCGA GCCGGTGTTG
ACGCGGTCGT GGCATTACCT GCTGCACCCG GGGTTGCGGC GGGCGGTGGA GGATTTTCTG
CTGCAGGAAC GGGAAGGGGT CAAGGGGTAT GCCGAAGAGG CGCGGGGGAT GTTGCCCTAC
CGCCGGGACT GA
 
Protein sequence
MKDPPGVRHL SDGPSLGILT VFRQRAENVT SLYSLAHLRD LSTATWDALV PAGQPFLRHA 
FLSAMEDSGS VARNTGWAAE HLVLERDGQV RALLPAYRKW HSFGEYVFDH GWADACERAG
IAYYPKLLGA VPFSPVSGPR LLTADPADGL LMLQALPEYL GKGGLSGAHI NFTDPALDAQ
LAGLPGWMER LGCQFHWQNR GYRDFQDFLD SLSSRKRKQM RKEREQVAGQ GIDFRWYRGD
ELDEAQWDFV FLCYANTYAV RRRAPYLTRE FFSLLAERMP EAVRVVMARQ GGRDVAMALS
LVGGDSLFGR YWGCLDEFDR LHFETCFYQG MDFAIAEGYQ RFDAGAQGEH KLIRGFEPVL
TRSWHYLLHP GLRRAVEDFL LQEREGVKGY AEEARGMLPY RRD