| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4485 |
|---|
| Symbol | |
|---|
| ID | 1043373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5095200 |
|---|
| End bp | 5095889 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637147885 |
|---|
| Product | polar amino acid ABC transporter inner membrane subunit |
|---|
| Protein accession | NP_746596 |
|---|
| Protein GI | 26991171 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG GCTACGGGGC AGTCATCCTC GACGGGGCGT GGCTGACGCT ACAGCTCGCC
CTGTCGTCGA TGGCCCTGGC CATCGTGCTC GGCCTGATCG GTGTGGCGCT GCGTTTGTCG
CCAGTGCGCT GGTTGGCCTG GCTGGGCGAT CTGTATTCCA CGGTGATCCG TGGTATTCCG
GACCTGGTCC TGATCCTGCT GATCTTCTAC GGCGGGCAAG ACATCATCAA CCGGGTGGCG
CCGCTGCTCG GCTATGAAGA CTATATCGAT CTGAATCCGC TGATTGCGGG TATCGGTACC
CTGGGCTTCA TCTTTGGCGC CTACCTCTCG GAAACCTTCC GCGGGGCCTT CCTGGGCATT
CCCAAGGGCC AGGCCGAGGC GGGCGTGGCG TATGGCATGA GCCCTCGCCA GGTGTTCTTC
CGTATCCAGG TGCCGCAAAT GATTCGCCTG GCCATTCCGG GCTTCACCAA CAACTGGCTG
GTGCTGACCA AGGCTACTGC GCTGATTTCG GTCGTCGGTC TGCAGGACAT GATGTTCAAG
GCCAAGCAGG CGGCTGACGC CACCCGCGAA CCCTTCACCT TCTTCCTGGC AGTGGCGGCG
CTGTACCTGG TGCTGACCAG TGTTTCGCTG TTGGCCCTGA AGTATCTGGA GCGCCGCTAC
TCGGTGGGCG TCAAGGTGGC TGAACTATGA
|
|---|
| Protein sequence | MLKGYGAVIL DGAWLTLQLA LSSMALAIVL GLIGVALRLS PVRWLAWLGD LYSTVIRGIP
DLVLILLIFY GGQDIINRVA PLLGYEDYID LNPLIAGIGT LGFIFGAYLS ETFRGAFLGI
PKGQAEAGVA YGMSPRQVFF RIQVPQMIRL AIPGFTNNWL VLTKATALIS VVGLQDMMFK
AKQAADATRE PFTFFLAVAA LYLVLTSVSL LALKYLERRY SVGVKVAEL
|
|---|
| |