| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4483 |
|---|
| Symbol | |
|---|
| ID | 1041857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5093718 |
|---|
| End bp | 5094482 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637147883 |
|---|
| Product | basic amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_746594 |
|---|
| Protein GI | 26991169 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.777233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAC TCGAAGTCCA AGACCTGCAC AAGCGCTACG GCAGCCACGA AGTGCTCAAG
GGCGTGTCGC TGGCGGCCAA GGCCGGCGAC GTCATCAGCA TCATCGGCTC CAGCGGTTCG
GGCAAGTCGA CCTTCCTGCG CTGCATCAAC CTGCTGGAGC AGCCGCACGC TGGCAAGATC
CTGCTCAACA ACGAAGAACT GAAGCTGGTC CCCGGCAAGG ATGGTGCGTT GAAGGCCGCC
GACCCGCGTC AATTGCAACG CATGCGTTCG CGCCTGTCGA TGGTGTTCCA GCACTTCAAC
CTGTGGTCGC ACATGACTGC GCTTGAGAAC ATCATCGAAG CGCCCGTGCA CGTGCTGGGC
GTGAACAAGA AGGAAGCCCT GGAAAAGGCC GAGCACTACC TGGCCAAGGT GGGTGTTGCC
CATCGCAAGG ATGCCTTCCC CGGGCATATG TCGGGGGGTG AGCAACAGCG TGTGGCAATT
GCCCGGGCGC TGGCCATGGA ACCGGAGGTC ATGCTGTTCG ACGAGCCGAC CTCGGCACTT
GACCCTGAGC TGGTGGGTGA TGTGCTGAAG GTGATGCAGG CGCTGGCCCA GGAAGGTCGG
ACCATGGTAG TGGTGACCCA CGAAATGGGC TTTGCCCGCG AGGTGTCCAA CCAGTTGGTG
TTCCTGCACA AAGGCCTGGT GGAAGAAACC GGCTGCCCAC GTGAAGTGCT GGCCAACCCG
CAGTCGGAGC GCCTGCAGCA GTTCCTCTCC GGCAGCCTGA AGTAA
|
|---|
| Protein sequence | MYKLEVQDLH KRYGSHEVLK GVSLAAKAGD VISIIGSSGS GKSTFLRCIN LLEQPHAGKI
LLNNEELKLV PGKDGALKAA DPRQLQRMRS RLSMVFQHFN LWSHMTALEN IIEAPVHVLG
VNKKEALEKA EHYLAKVGVA HRKDAFPGHM SGGEQQRVAI ARALAMEPEV MLFDEPTSAL
DPELVGDVLK VMQALAQEGR TMVVVTHEMG FAREVSNQLV FLHKGLVEET GCPREVLANP
QSERLQQFLS GSLK
|
|---|
| |