Gene PP_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4479 
SymbolaruG 
ID1041844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5088808 
End bp5089836 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID637147879 
Productarginine N-succinyltransferase, beta subunit 
Protein accessionNP_746590 
Protein GI26991165 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.198516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.241866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GTCCTGTACG CAGCAGCGAT TTGCCTGCGT TGATCGAATT GGCACGCAGC 
ACCGGCACCA CCGGGCTGAC CACGCTGCCG GCCAACGAAG AGCGCCTGGG GCATCGCGTT
GGTTGGGCGG AAAAAAGCTT TCGTGGCGAA GCCGAGCGTG GCGACACCGA TTACCTGTTC
GTGCTGGAAA ACGACGAAGG CCTGGTGGTG GGCATCAGTG CCATCGCCGG CGCCGTCGGC
CTGCGTGAGC CCTGGTACAA CTACCGGGTC GGCCTGACTG TCAGCGCCTC GCAGGAGCTG
AAGATCTACC GCGAAATCCC GACGCTGTTC CTGGCCAACG ACCTGACCGG CAACTCAGAG
CTGTGCTCGC TGTTCCTGCG CAGCGACTAC CGCTCGGGCC TCAATGGCCG CCTGCTGTCG
CGCGCGCGCA TGCTGTTCAT TGCCGAGTTC CCCGAGCTGT TCGGCAAGAA GATCATTGCC
GAAATGCGCG GCATGTCTGA CGAGCAGGGC CGTTCGCCGT TCTGGGAAAG CCTGGGCCGG
CATTTCTTCA AGATGGAGTT CAGCCAGGCC GACTACCTCA CCGGCGTGGG CAACAAGTCG
TTCATCGCCG AACTGATGCC CAAGTTCCCG CTGTACACCT GCTTCCTGTC CGAAGCGGCG
CGCAGTGTGA TCGGCCGTGT GCACAAAGAC ACCGAGCCGG CGCTGGCCAT GCTCAAGCAG
GAAGGCTTCA ACTACCAGGG CTACGTCGAC ATCTTCGATG CCGGCCCGGC CATCGAGTGT
GACACTGCCA AGATCCGCGC CGTACGCGAG AGCCAGACCC TGGTGCTGGC GGTAGGTACG
CCAGGCGATG ACGCGACCCC TTTCATCATC CACAACCGCA AGCGCGACGA CTGTCGCATC
ACTGCCGCAC CTGCACGGTT GGCCGCCGGC ACCCTGGTGG TCGACCCGTT GACCGCCAAA
CGCCTGCGCA TGGGCGTTGG CGACAATGTC CGCGCGGTGC CGCTGTCGGC CAGCCGGGAG
GCCCATTAA
 
Protein sequence
MIVRPVRSSD LPALIELARS TGTTGLTTLP ANEERLGHRV GWAEKSFRGE AERGDTDYLF 
VLENDEGLVV GISAIAGAVG LREPWYNYRV GLTVSASQEL KIYREIPTLF LANDLTGNSE
LCSLFLRSDY RSGLNGRLLS RARMLFIAEF PELFGKKIIA EMRGMSDEQG RSPFWESLGR
HFFKMEFSQA DYLTGVGNKS FIAELMPKFP LYTCFLSEAA RSVIGRVHKD TEPALAMLKQ
EGFNYQGYVD IFDAGPAIEC DTAKIRAVRE SQTLVLAVGT PGDDATPFII HNRKRDDCRI
TAAPARLAAG TLVVDPLTAK RLRMGVGDNV RAVPLSASRE AH