Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4415 |
Symbol | |
ID | 1043935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5010489 |
End bp | 5011589 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637147809 |
Product | hypothetical protein |
Protein accession | NP_746527 |
Protein GI | 26991102 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00689566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCACTT CAATTTTGTT CCAGCTTGAG CATGGCGCCG TGGCGCTCAA CGGCGTCACA AACTACGTGG TGCTGAATTG CCTGCAATGG AAGTCGCCAC ACCTCGAGAT GCTGGCTTCG GCGGCCAAGC AGAGCTTCGC GGTGATTTAC GAGAACGAGC TTGACCAGGA GCTGATCGAC TACCTAGAGC GGGTACATCT CCAAGGGGCG ATGTCAGCGG TGAAGCTGAT CATTGCAAAC GACGACCAGC TCTATGTGTT CTTGGATGGT CAAATTCCAA GCTCTGCCCT GCCAGCCCTC GAGTCAGTCT GGGAAACGGC CTTGGAATCG GATCACTCGA ACCCTTGGCG CGTGGGTTTC GCTAGTGTGG ACGAGCTCTA CACTGGCTGC TCCGACTGTA TTTTCTGGCC ATGTGCAAAA GACGTTCTTG AATCACACCC GCTTGGCCTG ACCGAGTTTA TGGACTCGGA TGCTCGCCCT CTCAGTAACT ACAATCCCTC AAAAGATTCG TCGACTTCAG TCCATGAAAT GGCTAAGCAT CTCGGGCCAA CGCAAAACGA GCATAAACAG CTCATTGACA AATACCTGCC AGTTTCGGCT AAGCAAGAGA TCTTACGTAG CTGTTGCATT CATGCGCTCT TGACAGATGG TATTCGAGCA CATGAGATAA CAAACTTGAT GGTGGGCGCC ATCTTCGTTT CACATTATGA GTATGGGTTA GCAGTAACCC GACACAAGAC GCTCGAATCC CAGGAACTTG CTCAAAGCTC ACAAAAGTCT GCAGCCTTGA TCTTGAGTCA TATCAAGCTG AATGACCTTT CGGATGGCGA TTTTTTGTTC CCCTCAAAAT ACTCGCCTGA ACGGCCAATG AGTAGACGAG AGCTTGAGCT CGCCATCCAT CCCAGAGTGA TTGAAAAGCA TCTTTCATTC TTGAGGAAAC GGCATAACGA ATGTCCCGAG TTTGCAACTA AGGACGTCGC AAGCTCGATC GCTCACCTGA TGGGACATCA CTCACCGGGC ATTGTTCAGC ACTATTTGTC AGCTCATCAG GCCCGTCGCA GCATCAGTTG CTTGATGGCG AACACAAACA ATCCGTCCTA A
|
Protein sequence | MPTSILFQLE HGAVALNGVT NYVVLNCLQW KSPHLEMLAS AAKQSFAVIY ENELDQELID YLERVHLQGA MSAVKLIIAN DDQLYVFLDG QIPSSALPAL ESVWETALES DHSNPWRVGF ASVDELYTGC SDCIFWPCAK DVLESHPLGL TEFMDSDARP LSNYNPSKDS STSVHEMAKH LGPTQNEHKQ LIDKYLPVSA KQEILRSCCI HALLTDGIRA HEITNLMVGA IFVSHYEYGL AVTRHKTLES QELAQSSQKS AALILSHIKL NDLSDGDFLF PSKYSPERPM SRRELELAIH PRVIEKHLSF LRKRHNECPE FATKDVASSI AHLMGHHSPG IVQHYLSAHQ ARRSISCLMA NTNNPS
|
| |