| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4189 |
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| Symbol | sucA |
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| ID | 1042413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4732802 |
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| End bp | 4735633 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147588 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | NP_746306 |
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| Protein GI | 26990881 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA GCGTGATGCA GCGCATGTGG GATAGCGCCC ACCTTTCAGG TGGTAACGCT
GCATATGTGG AAGAGCTCTA CGAGCTCTAC CTGCACGACC CTAACGCTGT GCCAGAAGAG
TGGCGCACTT ACTTCCAGAA GTTGCCAGCC GACGGCAGCA CCGCTACTGA TGTATCGCAC
TCGACAATCC GCGACCATTT CGTACTGCTG GCAAAGAACC AGCGCCGCGC CCAACCGGTT
TCCGCCGGGA GCGTGAGCAG TGAACACGAG AAGAAGCAGG TTGAAGTTCT GCGACTGATC
CAGGCCTATC GTATGCGCGG CCATCAGGCT GCCAAGCTCG ACCCGTTGGG GTTGTGGCAG
CGCCCTGCGC CCGTAGACCT GTCGATCAAT CACTACGGCT TGACCAATGC CGATCTTGAT
ACGACCTTCC GTGCCGGCGA CCTGTTCATC GGCAAAGAGG AGGCGAGCCT ACGCGACATC
TTCGATGCAC TCCAGAAGAC ATATTGTCGC ACCATTGGCG CCGAATTCAC CCACATCGTC
GATTCCGAGC AGCGCAGCTG GTTCCAGCAG CGCCTGGAAA GCGTGCGCGG CCGTCCGGAG
TATTCCGCTG ACGTGCAGGC CCACCTGCTC GAGCGCGTAA CCGCCGGTGA GGGCCTGGAA
AAGTACCTGG GCACCAAGTA CCCGGGCACC AAGCGATTCG GCCTTGAAGG CGGCGAGAGC
CTGATTCCGA TGCTGGATGA AATGATCCAG CGTTCCGGCT CTTACGGCGC CAAGGAGGTC
GTGATCGGCA TGGCCCACCG TGGCCGCCTG AACGTGCTGG TGAACACCTT CGGCAAGAAC
CCGCGCGAGC TGTTCGACGA GTTCGAAGGC AAGAAGATGA ACGAGCTGGG CTCCGGTGAC
GTGAAGTATC ACCAGGGCTT CTCCTCGAAC GTGATGACCC CGGGTGGCGA AGTGCACCTG
GCCATGGCGT TCAACCCGTC CCACCTGGAA ATCGTTTCGC CGGTGGTCGA GGGTTCGGTG
CGCGCCCGTC AGGACCGCCG CAACGACACC GTTGGCGACA AGGTGGTGCC GATCTCGATC
CACGGCGACG CTGCGTTCGC TGGCCAGGGC GTGGTCATGG AAACCTTCCA GATGTCGCAG
ACCCGCGGTT TCAAGACCGG CGGTACCGTG CACATCGTGA TCAACAACCA GGTTGGTTTC
ACCATCAGCA ACCCGCTGGA TGCGCGCTCC ACCGAGTACG CGACCGACGT TGCCAAGATG
ATCCAGGCAC CGATCCTGCA CGTGAACGGC GATGACCCGG AAGCCGTGCT GTTCGTTACC
CAGCTGGCCA TCGACTATCG CATGCAGTTC AAGCGTGACG TGGTCATCGA CCTGGTCTGC
TACCGTCGCC GTGGCCACAA CGAGGCTGAC GAGCCTAACG GCACCCAGCC GCTGATGTAC
CAGCAGATCA GCAAGCAGCG CACTACCCGT GAGCTGTATG CCGAGCAGCT GATCCAGGCC
GGTCGCATCG ACGCCGAGCG CGCTCAGGCC AAGATCGACG AGTACCGCAA CGCGCTGGAC
AATGGCCTGC ACGTGGTAAA AAGCCTGGTC AAGGAGCCGA ACCGCGAGCT GTTCGTCGAC
TGGCGTCCGT ACCTGGGCCA TGCCTGGACC GCGCGTCACG ACACCCGTTT CGACCTCAAG
ACCCTGCAGG ATCTGTCGGC CAAGCTGCTC GAGCTGCCGG AAGGTTTCGT GGTCCAGCGT
CAGGTGTCGA AGATCTACGA AGACCGTCAG AAGATGCAGG CCGGTGGCTT GCCGATCAAC
TGGGGTTATG CAGAGACCAT GGCTTACGCC ACCCTGCAGT TCGAAGGTCA CCCGATCCGC
ATGACCGGCC AGGACATCGG CCGTGGCACC TTCTCGCACC GTCACGCGGT GTTGCACAAC
CAGAAGGACG CCAGCACCTA CATTCCGTTG CAGAACCTGT TCCCAGGCCA GCCACGTTTC
GATCTGTACG ATTCGTTCCT GTCCGAGGAA GCGGTACTGG CCTTCGAATA CGGCTACTCC
ACCACCATGC CGAACGCGCT GGTGATCTGG GAAGCCCAGT TCGGCGACTT CGCCAACGGT
GCGCAAGTGG TGATCGACCA GTTCATCACC AGTGGTGAGC ACAAGTGGGG CCGCCTGTGC
GGTCTGACCA TGCTGCTGCC ACACGGCTAT GAAGGGCAGG GGCCGGAGCA CTCCTCCGCG
CGTCTGGAGC GTTACCTGCA GCTGTGCGCC GAGCACAACA TCCAGGTCTG CGTACCGACG
ACGCCGGCAC AGATTTACCA CCTGCTGCGT CGCCAGGTCA TTCGCCCGCT GCGCAAGCCG
CTGGTAGTCC TGACGCCGAA GTCGCTGCTG CGCCACAAGC TGGCCATCTC GACCCTGGAA
GACCTGGCAG AAGGCTCGTT CCAGACCGTG ATCCCGGAAA TCGACGCAAT CGATCCGGCC
AAGGTCGAGC GTCTGGTGCT GTGCAGCGGC AAGGTCTACT ACGACCTGCT GGAAAAACGC
CGTGCCGAAG GCCGCGAAGA CATCGCCATC CTGCGTATCG AGCAGCTGTA TCCGTTCCCT
GAGGACGATC TGGTCGAAAT CCTCGCCCCT TACACCAACC TCAAGCATGC GGTCTGGTGT
CAGGAAGAGC CGATGAACCA GGGCGCCTGG TACAGCAGCC AGCACCACAT GCGCCGTATC
CTGGGCCGCC ACAACAAGGC ACTGGTCCTG GAATACGCCG GTCGCGACGC TTCTGCCGCG
CCAGCCTGTG GTTACGCTTC GAAGCACGCC GAACAGCAGG AAAAACTGCT GCAAGACGCC
TTCACTGTCT AA
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| Protein sequence | MQESVMQRMW DSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPA DGSTATDVSH
STIRDHFVLL AKNQRRAQPV SAGSVSSEHE KKQVEVLRLI QAYRMRGHQA AKLDPLGLWQ
RPAPVDLSIN HYGLTNADLD TTFRAGDLFI GKEEASLRDI FDALQKTYCR TIGAEFTHIV
DSEQRSWFQQ RLESVRGRPE YSADVQAHLL ERVTAGEGLE KYLGTKYPGT KRFGLEGGES
LIPMLDEMIQ RSGSYGAKEV VIGMAHRGRL NVLVNTFGKN PRELFDEFEG KKMNELGSGD
VKYHQGFSSN VMTPGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRNDT VGDKVVPISI
HGDAAFAGQG VVMETFQMSQ TRGFKTGGTV HIVINNQVGF TISNPLDARS TEYATDVAKM
IQAPILHVNG DDPEAVLFVT QLAIDYRMQF KRDVVIDLVC YRRRGHNEAD EPNGTQPLMY
QQISKQRTTR ELYAEQLIQA GRIDAERAQA KIDEYRNALD NGLHVVKSLV KEPNRELFVD
WRPYLGHAWT ARHDTRFDLK TLQDLSAKLL ELPEGFVVQR QVSKIYEDRQ KMQAGGLPIN
WGYAETMAYA TLQFEGHPIR MTGQDIGRGT FSHRHAVLHN QKDASTYIPL QNLFPGQPRF
DLYDSFLSEE AVLAFEYGYS TTMPNALVIW EAQFGDFANG AQVVIDQFIT SGEHKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERYLQLCA EHNIQVCVPT TPAQIYHLLR RQVIRPLRKP
LVVLTPKSLL RHKLAISTLE DLAEGSFQTV IPEIDAIDPA KVERLVLCSG KVYYDLLEKR
RAEGREDIAI LRIEQLYPFP EDDLVEILAP YTNLKHAVWC QEEPMNQGAW YSSQHHMRRI
LGRHNKALVL EYAGRDASAA PACGYASKHA EQQEKLLQDA FTV
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