Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4156 |
Symbol | |
ID | 1042332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4696372 |
End bp | 4697277 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637147556 |
Product | LysR family transcriptional regulator |
Protein accession | NP_746274 |
Protein GI | 26990849 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTA CCAGCGACTC CCTGGCGATT TTCCTCGCGG TGCTCGATGC CGGCTCGTTC TCCGCCGCCG CCCGCAAGCT GGGCCGTGTG CCTTCAGCCG TGAGCATGGC AATCGCCCAA CTGGAAGCGG AACTGGACCT GCCCCTGTTC GACCGGGCCA CGCGCAAAGC CTTGCCCACC AACGCCGCCC TGGCGCTGGA GCCCCAGGCC AGGCAGGTCA TCTGCCAACT CAACCTGCTC GATGCCCAGG CCCTGCAATT GCACAAAGGC CTGGAAAAGC GCCTGACCAT CGCCATGGCG CCCGAGTTGC AGACTGGCCG CTGGAGCCAG CCGCTAGAAA TCCTCGCCCA GGCATTTCCC AGCCTGGAAG TCGAGGTACG TTCGGCCACC CAGACCGAAG CCATTCGCCT GCTGCATGAC GGCAGTGTGC AATTGGCCCT GGTGTTCGAA CGGCCCGGCA TCGATGAGCG CGAGTCATTC CTCGAGGCCG GCAGCCAACT GCTGGTAGCC GTTGCCTCAC CGCGCCATCC AGCCGGGCAG AACAGCGGTT CGCCATTGCC TGAAGAGGCC TTTGCCGAAC AACGGCAGAT CATCGTGGCT TCGGGCAAGG CCACCGGATC GGACCCGCGC ATGGTGCTGT CCCGGCGCAT CTGGCTGACC GACAGCTACC TCGCCACGCT GGACCTGGTG CAGTCCGGGC TGGGCTGGGC CTACCTGCCG CAGCCATTGG TCGAACCGCT GATTGCCTCG GGCGCACTGG CCGAGGTGCG CTTCGACAAC ATGGCCAACC GCCTGCGCTT GTGGGTAGAC ATCATCTGGA TCAAGTCGCG CCCGTTGGGC CTGGGCGCGC GACGCTACCT GGAAGTCATG CGCCAGCTGT TCGAGAAGGA GCCCCCCAGG GCCTGA
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Protein sequence | MAFTSDSLAI FLAVLDAGSF SAAARKLGRV PSAVSMAIAQ LEAELDLPLF DRATRKALPT NAALALEPQA RQVICQLNLL DAQALQLHKG LEKRLTIAMA PELQTGRWSQ PLEILAQAFP SLEVEVRSAT QTEAIRLLHD GSVQLALVFE RPGIDERESF LEAGSQLLVA VASPRHPAGQ NSGSPLPEEA FAEQRQIIVA SGKATGSDPR MVLSRRIWLT DSYLATLDLV QSGLGWAYLP QPLVEPLIAS GALAEVRFDN MANRLRLWVD IIWIKSRPLG LGARRYLEVM RQLFEKEPPR A
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