| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4106 |
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| Symbol | gabP |
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| ID | 1042234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4640416 |
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| End bp | 4641798 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147508 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_746226 |
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| Protein GI | 26990801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.486591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGC AAGACAACAA GAAACAGCGC TCACTGCAGC ACGGCCTGAC TTCCCGTCAG
GTTTCCATGA TCTCCATTGC CGGCATCATC GGCGCCGGGC TGTTCATCGG GTCCTCCAAC
GCCATTGCCA CCGCCGGCCC GGCCATCCTC ATCTCCTACG CCATGACTGG CCTGCTGGTC
TTGCTGGTGA TGCGCATGCT GGGTGAAATG GCCATCGCAA ACCCCAATAG CGGCTCTTTT
TCCACCTACG CCTCGGAGGC CATCGGGCCT TGGGCGGGCT TTACCATTGG CTGGTTGTAC
TGGTGGTTCT GGGTGTTGAT CATTCCGGTG GAGGCCATTG CCGGTGCTGA CATCCTGCAT
GCCTACTTCC CTGGCGTGCC GTCCTGGCTG TTCGCTTTCC TGATCATGCT GGTGCTGTCG
GGCACCAACC TGGTCAGCGT GAAGAACTTC GGTGCCTTCG AGTACTGGTT CGCGCTGGTC
AAGGTGGTCG CGATCATTGG CTTCATCGGG GTCTGCACCT TGGCGGTGTT CGGCTTCTGG
CCGCTGGCAG AGGTATCCGG GGTGAGCCGG CTGTGGGACA GCGGTGGTTT CATGCCCAAT
GGGTTTGGGA CGGTGCTTGG GGGCGTGCTG ATCACCATCT TCTCGTTCTT CGGTGCCGAA
ATTGTCACCA TCGCGGCTGA CGAAACCGCC AACCCGAAAG ACAAGATTCG CCGCGCCACC
AACCTGGTGG TGTACCGCAT CGCCATCTTC TACCTGGCGT CGATCTTCCT GGTGGTGTCG
CTGGTGGCCT GGAACGACCC CGGGCTCAAA GCGGTAGGGT CGTTCCAGCG TGTACTGGAA
GTGCTGAACG TGCCGGGCGC CAAGTTGCTG GTTGACCTGG TGGTGCTGGT GGCGGTGACA
AGTTGCATGA ACTCGGGGCT CTACACGGCG TCGCGCATGC TCTATTCGCT GGGCGCGCGT
GGTCAGGCGC TGAGCGTGAC CAAGCGCATC TCCGGTTCCG GCGTGCCGAC CGTGGCAGTG
ATCTTCTCCA CCCTGGCGGG CTTCGCTGGC TGCTTCGTCA ACTATGTGTT CCCGGGCAAA
GTGTTTGGCT TCCTGCTGTC GACCACCGGC GCCATCGCCT TGCTGGTGTA CCTGGTCATC
GCCGTGTCGC AACTGCGCAT GCGTGCCCGT GCCGAGCGTG AAGGGCGTCC GCTGGAACTG
AAGATGTGGC TGTTCCCATG GCTGACCTGG CTGGTGATAG GCACCATCGT CATGGTGCTG
GGCTACATGC TGTTCAGCGA TGCCTATCGC TACGAAACGC TGATGACTGC CGGGGTGACC
GCGTTCATTT TGCTGGTTTC GCTGACCCAG CGGCGTGCGA AGATGGTTGC CCAGACGGCC
TGA
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| Protein sequence | MASQDNKKQR SLQHGLTSRQ VSMISIAGII GAGLFIGSSN AIATAGPAIL ISYAMTGLLV
LLVMRMLGEM AIANPNSGSF STYASEAIGP WAGFTIGWLY WWFWVLIIPV EAIAGADILH
AYFPGVPSWL FAFLIMLVLS GTNLVSVKNF GAFEYWFALV KVVAIIGFIG VCTLAVFGFW
PLAEVSGVSR LWDSGGFMPN GFGTVLGGVL ITIFSFFGAE IVTIAADETA NPKDKIRRAT
NLVVYRIAIF YLASIFLVVS LVAWNDPGLK AVGSFQRVLE VLNVPGAKLL VDLVVLVAVT
SCMNSGLYTA SRMLYSLGAR GQALSVTKRI SGSGVPTVAV IFSTLAGFAG CFVNYVFPGK
VFGFLLSTTG AIALLVYLVI AVSQLRMRAR AEREGRPLEL KMWLFPWLTW LVIGTIVMVL
GYMLFSDAYR YETLMTAGVT AFILLVSLTQ RRAKMVAQTA
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