| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4105 |
|---|
| Symbol | |
|---|
| ID | 1042221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4639861 |
|---|
| End bp | 4640358 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637147507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746225 |
|---|
| Protein GI | 26990800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.445183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC ACACACTTTC CCTTCAAGCC CTCGCGGCCC CTGAGGGTAC TTGCTATGGC
TGCGGCTGTT CCCACCCCAG CGGCCTGCAC CTGCAAAGCC ACTGGGACGC CGACGGTGTT
CACCTGGTGT GCCGTCACTC GCCCGACAGC ACCTTCATTG GCTGGCCTGG CCTGGTTTAC
GGTGGCCTGC TGGCGATGCT GGTTGACTGC CACTCCAACT GGACGGCGAT GGCCTACCAC
TACCGTAACG AAGGCCGAGA ACCGGGCAGC CTGCCGCGTA TCGACTGCGT TACCGGCACG
CTCAACCTGA CCTACCTGAA ACCTACGCCG ATGGGCGTCG AGCTGTTGCT CAAGGCGCGT
GTCGAAGGCG AAGTGGGGCG CAAGAGCCGG GTCATCTGCG AAGTCTGGGC AGAGGATGTA
CTGACTGTGA CTGCCGACTC CGTGTTTGTC CGCGTCGATA CCGAAAAGCT CAAGCTCAAG
GCCCACGGCC AGGCCTGA
|
|---|
| Protein sequence | MTDHTLSLQA LAAPEGTCYG CGCSHPSGLH LQSHWDADGV HLVCRHSPDS TFIGWPGLVY
GGLLAMLVDC HSNWTAMAYH YRNEGREPGS LPRIDCVTGT LNLTYLKPTP MGVELLLKAR
VEGEVGRKSR VICEVWAEDV LTVTADSVFV RVDTEKLKLK AHGQA
|
|---|
| |