Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4084 |
Symbol | |
ID | 1042186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4613142 |
End bp | 4613573 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637147489 |
Product | hypothetical protein |
Protein accession | NP_746208 |
Protein GI | 26990783 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.342625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0052905 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGAT ACCTGACGCA CGATGTAATC CTCAATCTGG GTGATGAAGC CCACGAGGAC TCGACGCTGA ACATGCTGCG CTTTCCCGAC AGGCAAACCA CGTTGGTGAT CGCTCGCAGC CCTGTTGCAA CCACCAAGAC CCTGGATGAG GCCTTGGAGG AGCAACTGAA CGTATTACGG AAGAAGTCAA AGGCGCTGAC CATTACGCCC GCGAAAGTGA CCCGCCTTGG AAGCAATGAG CATCCCGTCG ACAGTCGGGA AATGGCCATC CAGTTCATGG TCGGCGACAA GCCCCACTAC CAGCTTCAGG CGGCCTGCCT GATACCGGGA CAGCAACGGA TGCTGGTGCT CAACTACAGC AAGCCTGGGC CTTTGAGTGA CGACGATATC AGCCACTGGC GCGCGCTTAA AGACGAGCTC CGATTTGCCT GA
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Protein sequence | MTRYLTHDVI LNLGDEAHED STLNMLRFPD RQTTLVIARS PVATTKTLDE ALEEQLNVLR KKSKALTITP AKVTRLGSNE HPVDSREMAI QFMVGDKPHY QLQAACLIPG QQRMLVLNYS KPGPLSDDDI SHWRALKDEL RFA
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