| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4012 |
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| Symbol | |
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| ID | 1046547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4522151 |
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| End bp | 4524376 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147423 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | NP_746142 |
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| Protein GI | 26990717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.225038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC GTTCCAAGAT CATCTATACC TTCACCGACG AAGCCCCCGC CCTCGCCACT
TACTCGCTGC TGCCGATCAT CGAAGCGTTC ACCGCTTCGG CTGACATCGC TGTCGAAACT
CGCGACATTT CCCTGGCTGG CCGTATCCTT GCCGCCTTCC CGGAGCAACT GGGCGCAGAG
AAGCAAGTAG GCGATCACCT GGCGGAACTG GGCCAGCTGG CTACCACCCC TGAAGCCAAC
ATCATCAAGC TGCCGAACAT CAGCGCCTCG GTACCGCAGC TCAAAGCCGC GATCAAGGAA
CTGCAAGGCA AGGGCTTCAA CATCCCTGAC TACGCCGACG AGCCGGCCAC CGCGGAAGAA
AAAGAATCCC GCGCCCGCTA CGACCGCATC AAGGGCTCCG CCGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCCCG CAAGCACCCA
CACAAGATGG GCGCCTGGGC CGCTGACTCC AAGTCGCACG TTGCCCACAT GACCCAGGGC
GACTTCTACG GCAGCGAAAA AGCCGCACTG ATCGAAGCTG ACGACAGCCT GCGCATCGAG
CTGGTCGGCA AAGACGGCAG CACCACCGTG CTGAAAGAAA AGACCGCCGT CAAAGCCGCC
GAAGTCATCG ACTGCGCCAC CATGAGCCGC AAGGCCCTGA AAGCCTTCAT CGCCGAGCAG
ATCGCCGATG CCAAGGCCGC TGGCGTGCTG CTGTCGGTGC ACCTGAAAGC CACCATGATG
AAGGTCTCCG ACCCGATCAT GTTCGGCGTC ATCGTCGAAG AATTCTACAA CGACGTGCTG
ACCAAGCACG CCGCTGCCCT GGCCGAAGTA GGCTTCAACG CCAACAACGG TATCGGCGAC
CTGTACGCCC GCATCAAGGA CCTGCCAGCC GACAAGCAGG CCGAGATCGA AGCCGACATC
CAGGCCCTGT ACGCAGAGCG CCCAGCCCTG GCCATGGTCA ACTCCGACAA AGGCATCACC
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCCTCGA TGCCGGCCAT GATCCGTGAC
TCGGGCAAGA TGTGGAACGC CGCAGGCGAA CTGCAAGACG CCAAGGCCGT GATCCCGGAC
CGCTGCTACG CCGGCATCTA CCAGGCCACC ATCGAAGACT GCAAGGTCAA CGGTGCCTTC
GACCCGACCA CCATGGGCAG CGTGCCGAAC GTTGGCCTGA TGGCGCAGAA AGCCGAAGAG
TATGGCTCCC ACGACAAGAC CTTCCAGATC AAGGCTGACG GCGTGGTTCG CGTAGTCGAT
GGCAAGGGCA ACGTCGTGCT GGAGCAGAAC GTCGAAGCCG GTGACATCTT CCGCATGTGC
CAGACCAAGG ACGCGCCGAT CCAGGATTGG GTCAAGCTGG CCGTCAACCG TGCCCGCCTG
AGCAACACCC CGGCGGTGTT CTGGCTGGAC CCGGCTCGTG CCCACGACGG CGTCATGATC
GAGAAGGTGC AGAAGTACCT GAAAGATCAC GACACCACCG GCCTGGACAT CCGTATCCTG
GCACCGGTCG ACGCCATCAA GTTCTCCCTG GCCCGCATCC GCGAAGGCAA GGACACCATC
TCGGTGACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTG
GGCACAAGCG CCAAGATGCT GTCGATCGTG CCGCTGATGA ACGGCGGTGG CCTGTTCGAA
ACCGGCGCCG GCGGTTCGGC TCCGAAGCAC GTGCAACAGC TGGTTGAAGA GAACTTCCTG
CGTTGGGACT CGCTGGGTGA ATTCCTGGCC CTGGCCGCTT CCCTGGAGCA CCTGGGCAAC
ACCTACGACA ACCCGCGCGC CAAGGTTCTG GCCAACACCC TGGACCAGGC TACCGGCAAG
TTCCTCGACA CCAACAAGTC GCCATCGCGC AAAGTCGGCG GTATCGACAA CCGCGGTAGC
CACTTCTACC TGACCCTGTA CTGGGCCGAG GCCCTGGCCG CTCAGACGGA CGACGCTGCC
CTGCAGGCAC GCTTCGCACC ACTGGCAAAA ACCCTGGCCG AGAACGAAGC GACCATCGTC
GCCGAGCTCA ACGCCGTTCA GGGCAAGCCA GCCGACATCG GCGGCTACTA CGCCCCGGAT
GCCGAGCTGA CCGCCAAGGT GATGCGCCCA AGCCAGACCC TGAACAGCGC CATCGCTGCC
CTGTAA
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| Protein sequence | MPTRSKIIYT FTDEAPALAT YSLLPIIEAF TASADIAVET RDISLAGRIL AAFPEQLGAE
KQVGDHLAEL GQLATTPEAN IIKLPNISAS VPQLKAAIKE LQGKGFNIPD YADEPATAEE
KESRARYDRI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWAADS KSHVAHMTQG
DFYGSEKAAL IEADDSLRIE LVGKDGSTTV LKEKTAVKAA EVIDCATMSR KALKAFIAEQ
IADAKAAGVL LSVHLKATMM KVSDPIMFGV IVEEFYNDVL TKHAAALAEV GFNANNGIGD
LYARIKDLPA DKQAEIEADI QALYAERPAL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGKMWNAAGE LQDAKAVIPD RCYAGIYQAT IEDCKVNGAF DPTTMGSVPN VGLMAQKAEE
YGSHDKTFQI KADGVVRVVD GKGNVVLEQN VEAGDIFRMC QTKDAPIQDW VKLAVNRARL
SNTPAVFWLD PARAHDGVMI EKVQKYLKDH DTTGLDIRIL APVDAIKFSL ARIREGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMNGGGLFE TGAGGSAPKH VQQLVEENFL
RWDSLGEFLA LAASLEHLGN TYDNPRAKVL ANTLDQATGK FLDTNKSPSR KVGGIDNRGS
HFYLTLYWAE ALAAQTDDAA LQARFAPLAK TLAENEATIV AELNAVQGKP ADIGGYYAPD
AELTAKVMRP SQTLNSAIAA L
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