| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3984 |
|---|
| Symbol | |
|---|
| ID | 1046579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4493378 |
|---|
| End bp | 4493638 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637147394 |
|---|
| Product | ISPpu13, transposase Orf3 |
|---|
| Protein accession | NP_746114 |
|---|
| Protein GI | 26990689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00560225 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACG ACGAAAAACT GATTGAAGAC GCAGTGCTTG CCTTGTTGGC AGCCTATAGC
TCCGACAAAG GTAACGCGTG GAAAGGATTT GACTTCGAGA TCATGAATCG ACTGCATGAA
CAGGGTTTCA TCAGTGATCC AGTTAATAGA AACAAATCCA TCTGGTTGAC GGCGGAGGGG
CTGGAGCGAG GCCGACAGCT AGCTGACCAG TTGTTCGGGT TGAAGAGTCA AGCGGGGCAG
GTGCCCGACT CGAATACCTG A
|
|---|
| Protein sequence | MEYDEKLIED AVLALLAAYS SDKGNAWKGF DFEIMNRLHE QGFISDPVNR NKSIWLTAEG
LERGRQLADQ LFGLKSQAGQ VPDSNT
|
|---|
| |