Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3933 |
Symbol | |
ID | 1046632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4438264 |
End bp | 4439025 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147343 |
Product | hypothetical protein |
Protein accession | NP_746063 |
Protein GI | 26990638 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000513433 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0196237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATA TTGCTGTGCT TTCTGTGTTC GCCTTCGCCG CTGGGTTGAT CGACGCCGCG GTGGGTGGCG GCGGGCTGAT CCAGATCCCG GCCTTGTTCA ACGTGTTGCC CTCCGCGCAA CCGGCCGCCT TGCTCGGCAG CAACAAACTG GCGTCCGTGT GCGGCACGGC CTTCGCGGCC CGCTCGTTCA TCCGTAAAGT GACGCTGGAT TGGGGGTTGA TCGTACCGGC GGCACTCAGT GCCTTTGTCA TGTCGTTCGC GGGGGCCGCC ACGGTGTCGC TGGTACCCCC CAGCGTGATG CGTCCGGCGG TGCTGGTGCT GATCGTGCTG ATGGCTGTCT ACACCTTCTG CAAGAAGGAC TTCGGCACCT TGCACACACC TGCCCAGGTC GGCCGCAAGG AGCAGTGCCT GGCAGTGCTG ATCGGCGGTG CTATCGGCTT CTACGATGGC CTGTTCGGCC CGGGCACCGG TAGCTTCCTG ATCTTCCTGT TCATCCGCTT CTTTGCCCTG GACTTCCTGC ACGCCTCGGC TTCGGCCAAG GTGGTGAACA TTGCCACCAA CCTGGCGGCG CTGGTGTTCT TCGTGCCGAC GGGCAACGTG CTGTACGCCA TAGCCTTGCC CATGGCAGTG TGCAACATTC TCGGCGCGCT GACCGGTACC TGGCTGGCGG TACGCAAGGG TGCCGGGTTT GTCCGCGGGC TGTTCCTGGT GCTGTTGTGT GTGCTGATCG CCAAGCTGTC GTGGGACCTG CTGGCCGGCT AG
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Protein sequence | MMDIAVLSVF AFAAGLIDAA VGGGGLIQIP ALFNVLPSAQ PAALLGSNKL ASVCGTAFAA RSFIRKVTLD WGLIVPAALS AFVMSFAGAA TVSLVPPSVM RPAVLVLIVL MAVYTFCKKD FGTLHTPAQV GRKEQCLAVL IGGAIGFYDG LFGPGTGSFL IFLFIRFFAL DFLHASASAK VVNIATNLAA LVFFVPTGNV LYAIALPMAV CNILGALTGT WLAVRKGAGF VRGLFLVLLC VLIAKLSWDL LAG
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