| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3926 |
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| Symbol | |
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| ID | 1046639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4431333 |
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| End bp | 4432100 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147336 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_746056 |
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| Protein GI | 26990631 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.411324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0487597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA CCCACCTGTT CGACCTCGAC GGCAAGATTG CCTTTGTTTC CGGCGCCAGC
CGTGGCATCG GCGAGGCCAT CGCCCACTTG CTCGCGCAGC AAGGGGCCCA TGTGATCGTT
TCCAGCCGCA AGCTTGACGG GTGCCAGCAG GTGGCCGACG CCATCATTGC CGCCGGCGGC
AAGGCCACGG CTGTGGCCTG CCACATTGGT GAGCTGGAAC AGATTCAGCA GGTGTTCGCC
GGCATTCGCG AACAGTTCGG GCGACTGGAC GTGCTGGTCA ACAATGCAGC CACCAACCCG
CAATTCTGCA ATGTGCTGGA CACCGACCCA GGGGCGTTCC AGAAGACCGT GGACGTGAAC
ATCCGTGGTT ACTTCTTCAT GTCGGTGGAG GCTGGCAAGC TGATGCGCGA GAACGGCGGC
GGCAGCATCA TCAACGTGGC GTCGATCAAC GGTGTTTCAC CCGGGCTGTT CCAAGGCATC
TACTCGGTGA CCAAGGCGGC GGTCATCAAC ATGACCAAGG TGTTCGCCAA AGAGTGTGCA
CCCTTCGGTA TTCGCTGCAA CGCGCTACTG CCGGGGCTGA CCGATACCAA GTTCGCTTCG
GCATTGGTGA AGAACGAAGC CATCCTCAAC GCCGCCTTGC AGCAGATCCC CCTCAAACGC
GTGGCCGACC CCAAGGAAAT GGCGGGTGCG GTGCTGTACC TGGCCAGCGA TGCCTCCAGC
TACACCACCG GCACCACGCT CAATGTCGAC GGTGGCTTCC TGTCCTGA
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| Protein sequence | MSKTHLFDLD GKIAFVSGAS RGIGEAIAHL LAQQGAHVIV SSRKLDGCQQ VADAIIAAGG
KATAVACHIG ELEQIQQVFA GIREQFGRLD VLVNNAATNP QFCNVLDTDP GAFQKTVDVN
IRGYFFMSVE AGKLMRENGG GSIINVASIN GVSPGLFQGI YSVTKAAVIN MTKVFAKECA
PFGIRCNALL PGLTDTKFAS ALVKNEAILN AALQQIPLKR VADPKEMAGA VLYLASDASS
YTTGTTLNVD GGFLS
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