| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3884 |
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| Symbol | |
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| ID | 1046681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4404038 |
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| End bp | 4404361 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147293 |
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| Product | phage holin |
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| Protein accession | NP_746014 |
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| Protein GI | 26990589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01594] phage holin, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.609638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00338957 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAAACA TGCCCGAGAA GGATCCTGGC CTGTGGGCCG CTGTGCTCGC CTGGGTGCTG
GCTCACCAGC CTCAGCTGTA CGCTGCTGGC CTGTCGGTCG CGATCGCTGC CCTTCGGGTT
GTGTATGGCG GCGGGACCAG GCGACAGATG ATGCTGGAGG GCGCGCTCTG TGGCCTCATC
ACCCTGGCCT TGGTGCCGCT GCTCGAATGG ATGGGTTTGC CGCAGGGCAT GGCCACCTTC
GCGGGCGGTG CTGTCGGGTT CATGGGAGTA GAAAAGCTGC GTGGCTACTC CGACCTGTTC
TTGTCTCGTA AAGCGCAGGG GTGA
|
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| Protein sequence | MPNMPEKDPG LWAAVLAWVL AHQPQLYAAG LSVAIAALRV VYGGGTRRQM MLEGALCGLI
TLALVPLLEW MGLPQGMATF AGGAVGFMGV EKLRGYSDLF LSRKAQG
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