| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3731 |
|---|
| Symbol | |
|---|
| ID | 1046327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4257690 |
|---|
| End bp | 4258334 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637147141 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | NP_745863 |
|---|
| Protein GI | 26990438 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGG AAGCCCGCTA CCACCGCATG CTGCCGGAAT TGCGCAAAGC CAACCTGGTC
GAGGCGACCC TGGTGTGCCT CAAACGCCAT GGTTTCCAGG GGGCGTCGAT CCGCAAGATT
TCGGCCGAGG CCGGGGTCTC GGTCGGGCTG ATCAGCCACC ATTACGCGGG CAAGGACGAA
CTGGTGGCAG AGGCTTACAT GGCCGTCACC GGTCGGGTGA TGGGCCTGTT GCGTGAGGCC
ATGGCCCAGG CCGCGCCCAA TGCCCGCGAG CGGCTGTCCG CGTTCTTTCG TGCCTCGTTC
TGCGCCGAGC TGCTCGACCC GCAATTGCTC GATGCCTGGC TGGCTTTCTG GGGGGCGGTG
AAGACCGCCG ACGCGATCAA CCAGGTGCAC GACCACTCCT ACGGCGAGTA CCGCAACGAA
CTTGGCCAGC TACTGGCCAG GCTGGCCGAG GAGGAGGGCT GGCAGGGCTT CGATGCCGAC
CTGGCGGCCA TCAGCCTGAG CGCCTTGCTT GATGGCCTGT GGCTGGAGTC GGGCCTGAAC
CCCGGCACCT TCACCCCCGA GCAGGGCGTG ATCATCTGCG AGGCCTGGGT CGACGGCCTG
CAGGCCGGTG GCCGCAGGCG CTTCAGCCTG TCCGAGGGCT GTTGA
|
|---|
| Protein sequence | MTQEARYHRM LPELRKANLV EATLVCLKRH GFQGASIRKI SAEAGVSVGL ISHHYAGKDE
LVAEAYMAVT GRVMGLLREA MAQAAPNARE RLSAFFRASF CAELLDPQLL DAWLAFWGAV
KTADAINQVH DHSYGEYRNE LGQLLARLAE EEGWQGFDAD LAAISLSALL DGLWLESGLN
PGTFTPEQGV IICEAWVDGL QAGGRRRFSL SEGC
|
|---|
| |