Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3722 |
Symbol | alr |
ID | 1043924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4245041 |
End bp | 4246270 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147133 |
Product | alanine racemase |
Protein accession | NP_745855 |
Protein GI | 26990430 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.153642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.764242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTTC GCCGTACCCT TCTGGCTGCA TCCCTGGCAC TTCTGATCAC CGGACAGGCC CCCCTGTATG CGGCACCACC GTTGTCGATG GACAACGGCA CCAACACCCT GACCGTGCAA AACAGCAATG CCTGGGTCGA AGTCAGCGCC AGCGCCCTGC AGCACAACAT CCGCACGCTG CAGGCCGAGC TGGCCGGCAA GTCCAAGCTG TGCGCCGTGC TCAAGGCCGA TGCCTATGGC CACGGTATCG GCCTGGTAAT GCCATCGATC ATCGCCCAAG GCGTGCCCTG CGTGGCGGTG GCCAGCAACG AGGAGGCCCG CGTGGTCCGC GCCAGTGGCT TCACCGGGCA ACTGGTGCGG GTACGCCTGG CCAGCCTCAG CGAGCTGGAA GATGGCTTGC AGTACGACAT GGAAGAGCTG GTGGGCAGCG CGGAATTTGC CCGCCAGGCC GATGCCATCG CCGCGCGCCA TGGCAAGACC TTGCGCATTC ACATGGCGCT CAACTCCAGC GGCATGAGCC GCAACGGGGT GGAGATGGCC ACCTGGTCCG GCCGTGGCGA AGCGCTGCAG ATCACCGACC AGAAGCACCT CAAGCTGGTC GCGCTGATGA CCCACTTCGC CGTGGAAGAC AAGGACGATG TACGCAAGGG CCTGGCGGCA TTCAACGAGC AGACCGACTG GTTGATCAAG CACGCCAGGC TGGACCGCAG CAAGCTCACC CTGCACGCCG CCAACTCGTT CGCTACGCTG GAAGTGCCGG AAGCGCGCCT GGACATGGTA CGAACGGGTG GCGCGCTGTT CGGCGACACC GTGCCGGCGC GCACCGAGTA CAAACGTGCG ATGCAGTTCA AATCGCACGT GGCGGCGGTG CACAGCTATC CGGCCGGCAA CACCGTGGGC TATGACCGCA CCTTCACCCT GGCCCGTGAT TCGCGGCTGG CCAACATTAC GGTCGGGTAC TCCGATGGCT ACCGCCGGGT ATTCACCAAC AAGGGCCATG TGCTGATCAA CGGCCACCGT GTGCCGGTCG TGGGCAAGGT GTCGATGAAC ACGCTGATGG TCGATGTCAC CGACTTCCCT GATGTGAAGG GGGGTAACGA AGTGGTGCTG TTCGGCAAGC AGGCCGGGGG CGAAATCACC CAGGCCGAGA TGGAAGAAAT CAACGGCGCG TTGCTCGCCG ATTTGTACAC CGTATGGGGC AATTCCAACC CGAAGATACT CGTCGACTGA
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Protein sequence | MPFRRTLLAA SLALLITGQA PLYAAPPLSM DNGTNTLTVQ NSNAWVEVSA SALQHNIRTL QAELAGKSKL CAVLKADAYG HGIGLVMPSI IAQGVPCVAV ASNEEARVVR ASGFTGQLVR VRLASLSELE DGLQYDMEEL VGSAEFARQA DAIAARHGKT LRIHMALNSS GMSRNGVEMA TWSGRGEALQ ITDQKHLKLV ALMTHFAVED KDDVRKGLAA FNEQTDWLIK HARLDRSKLT LHAANSFATL EVPEARLDMV RTGGALFGDT VPARTEYKRA MQFKSHVAAV HSYPAGNTVG YDRTFTLARD SRLANITVGY SDGYRRVFTN KGHVLINGHR VPVVGKVSMN TLMVDVTDFP DVKGGNEVVL FGKQAGGEIT QAEMEEINGA LLADLYTVWG NSNPKILVD
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