| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3691 |
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| Symbol | |
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| ID | 1046263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4201148 |
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| End bp | 4207771 |
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| Gene Length | 6624 bp |
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| Protein Length | 2207 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637147102 |
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| Product | DNA helicase-related protein |
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| Protein accession | NP_745824 |
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| Protein GI | 26990399 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00449824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGACA TCGTTCAGCC CCTCAAAGCT CAAGAAGAAA TCCCGCCTAA AGAAGTCAAG
ATCCTGGCCA CCTTGGTGGC GAAACTGAAC CTTGCCGACT TCCAGAACGC CATTCCCGTA
ATTCGCGAAC TTCGGATCGC GAACGAGACC GAAGACCGCT TCGTCAATGC AACACTGACC
TTGACCTCCG ACCCCGAGGT TTTCAAACCC AAGGTATGGC GGATTGATGA AGTCGCTGCG
GACAGCTTCC GGATCATTCC CGGACTTGAT TTGGTTTTAG ATGGCCCGTT GCTTAGTCGT
CTGACCGAAG CTGAGCTTTC GACATTCACC TTCGTCTTCG AGGCGGATGA CAAAGAAGCC
GAGAGTGGCA GAAAGGAGGT TGCACGTATT GAGCAAGTCG TAGACCTTCT GCCCCGAAAT
CAGTGGGGTG GTTTGCGGCA TATTCCTGAC ATGACGGCTG CCTTCGTTCA GCCGAATGAT
CCAGCAGTTG AACGACTCTT GAAGCAGACG GCTGAGCTGC TTCGCCAAAG TGAACTGTCC
TCATCGCTGG ATGGTTACGA GGGTGGCGCG AAGCGAGCTT GGCAACTCGC GTCTGCGGTT
TGGAGCGCCG TCGCACGGAT GAAGCTCGAC TATGCATTGC CGCCAGCCAG CTTTGAACAG
TCAGGTCAAA AGGTGCGTAG CCCAAGCCAG ATTGCTGATA CTGGTTTGGC TACCTGCATG
GATCTCACCC TGCTGTTCTG CGCTGCCCTG GAGCAAATCG GGCTCAACCC GGTCATCGTA
TTCACTCGCG GTCACGCTTT CGCAGGACTG TGGATGAAGG CAGAGGAGTT CACGACTGCT
CTAATCGATG ATGTTACGGC GGTTCGCAAG CGGGTGAAGC TGCGGGAGCT GGTTCTATTT
GAAACAACGC TCAGTACGCA GAATCTTGTT CCAACCTTCT CCTATGCAGT CGAGAGAGGT
GAAAAACAGA TTGCCGAAGA CGCGGACAGC GAATTTGAAA TGCTGCTCGA CATTCGGCGG
GCTCGACTGC AGCGGATCAA ACCGCTCGCA AGTGCAGAGG CCCAGATCGC TCGGATTGCT
GATGAGGTTT CGGACGACTC TCCATCGCTC CTAGTCGAGG ACGGGGCGGG CATCCCAGAT
GAAATCCACG AGGTGGTAGT CGAAGATCTT TCGAAGCTCG ACCCGGCAGA TCGGCTTGGC
AGGTGGCAGC GCAAGCTCTT GGATCTTTCG CTTCGAAACA ACCTCTTGAA CTTCAAGATG
GCCAAGAGAG CGCTGAAACT TGAGTCACCC GACCCGGGCG CGCTCGAGGA TATTTTGGCA
AGCGGGCAGT CGCTGAAGCT GCTGACCAGG CCTGACCTTA TGGACGGTGC CGATCCGCGG
GAGCGCGCTC TTTACGAACA GCGTGAGCGG GAGGATGTTC GTCGACGCCA TGCCGAGGAT
GCTCTTAAGC GAAGAGAGGT GTTCGTCGCG CTGACATCTA ACGAGATGGA CGTCCGACTC
ACCGAACTGT ACCGAGGTGC TCGCACAGCC CTTCAGGAAG GCGGCTCTAA TACGCTCTTC
CTGGCGATCG GCTTCCTGAG TTGGACGCGC GAGGACAGGG CAGGGCAGAA GTACAAGGCA
CCATTGGTTT TGGTTCCGGT TACGTTGGAG CGCAAGAGCG CTCGCTCCGG ATTCACCATG
GTGCTCCACG ATGATGAGCC GCGCTTCAAC CCAACCCTTA TCGAGATGCT TCGGCAGGAT
TTCGAGCTGG GCTTGGGCTC GCTGGAGCAC GAGCTGCCTC GGGACGATTC GGGTCTTGAT
ATCGCAGGCA TCTGGAACAA AGTCGGCCAT GCTATCAAGG ACATCCCAGG CTGGGAGTTG
AGCGAAGACG TCGTGCTGTC GATGTTCTCG TTTGCCAAGT ACCTCATGTG GAAGGATCTG
GCCGAAAATG CCGAGCACCT CCGGCAGAGC CCAGTGGTTC AGCACCTGCT GGATACACCA
CGTGATTCGT TCGTTTCGGA TACTCCTTTC CCTGAGGCCG AGTCGCTGGA TCGTGACTAT
GGGCCGACCG ACGTCTTCTG CCCACTGCCA TCTGACTCCT CTCAACTTTC GGCGGTGATG
GCCGCAGCCA AAGGCAAAGA CTTTGTACTC ATCGGCCCAC CTGGCACCGG CAAGAGCCAG
ACCATCTCCA ACATGATCGC TCAGTCGATT GCCCAGGGGC GTCGTGTGCT GTTCGTCTCG
GAAAAGATCG CCGCGCTGGA TGTGGTGTAT CGGCGGCTGC GTGAGATTGG TCTTGGTGAG
TTCTGTCTGG AGCTCCACTC CAGCAAGGCT CGTAAAACTG ATGTGCTGGC TCAACTGCAG
TCCGCTTGGG AGGCGAAAGG GCAGCTCGAT TCCGCTGCAT GGGAGGTTGA GGCTCAGCGT
CTCGCAACGC TGCGCGACAG CCTGAACATT TACGTTGAGC GACTGCACCG GCGCCATCGC
AACGGTTACT CCATCTACGA TGCGATTGGC ACCGTCACTT CGGGAGGCGA TGAAGCTGTT
GCGCCTGTCG GCTGGGCTTC ACCTGACACG CATGACCAGA AGGCCATGCT TGAGTTACGT
GAGTTAGGCG ATCGCCTCGA AGTGAACGCG CAGGCTGTGG GGTACAGTCT ACTTGCCGGC
AATGCGTTGT CCGCAGTTGG CCAAGCGGAA TGGTCACCTC ATTGGCAACA GCAGTTCGTG
CAGGCGGCTC GTGATGTGTT GCCTGTCGTG CTAGATGTGC AGCGGGCGGC TGATCGGTTC
GTTGAGTTGG CTGGGCTCCC AGTTACGGAG TACACCCCGA CTGCATTGGA GGGGTTGTCA
GTCCTTTCCC AGGCACTGCC AGCTGCAGCA GGACAAGATT GGCGCTTCGC GCTACGGCCT
GATGCCCGTT CCATTTCCCA ACGGCTGAGC GATGGCTGTG CATGGGTTGA ACAACACCGA
GCGCTCAACG TTAAGCTTTC GCCGCTCTGG TCTTCTCGCG TCATGGCCGA TGCGAAGCAG
GGTATCGAGT TGCTACAGCA ACGTCGTACC ACCTTCGGTG AGCTCAGCCC GGCCTGGCCG
GAGAGTGTCA CCGATGTCCT TGCTCAGGCG GTGGCACTGC TTGGCCAAAT AGTAGAGCTC
AAGCAGCAGC TCAGTGCGAC CTATGGCGAT ACGATTGAGT CGCTCGACAT CGATCTGTTG
CTGCGCGAGT GGAAGGAAGC TGAAGAAGCG TTCTGGCCAA AATCCTGGTT CGGCAAGCGT
CGTATCGCAG GTTTGTTGGC GCCGTCTCAA ACCACTGCGG GCGAAGCGGA TCACGGTAAA
GATCTGGCCA CCTGGGCAGA GATCCGCGCC GTGCGTCGCG CCATCGATGA GCTAGAACCC
GGGCATGAGT GCGTTGTCGT TTGGCAAGGT TCAAAGTCTG TGGCTGAGCA GCTGTCGACG
TCGATCAAGC TTCAAGAGGC CATTCGGCTC CAGCAAGCAG ACTCGGACTG GATCGATGAT
GGGCTCCAGT TGGTCGAGCA AGGCCAGCTG GGTGATGGAT TGAAGGAAGA GCTGCGACGG
CTTCGCACGC TGACTCGCCT TGATAGCGAT ATGTCTGCCT TGTCCGACCT TGGCTCGAGC
ACTCAGCAGC TTTGGTGCGG CAAGGACACT AACATTGAAC TCCTTACTGC AGCGCTGCGC
TTCCAGGCTG AGCGTCGGGA TATCGAAGAA CGCGGTCGCC TTGTTGATGA TCACCCAGAA
GTGCAGGAGG GCCGCTGTGG AGCGTTGCTT AAAGGTGACT TCGACCTGTT AAAGCAGCGG
GCAGCGGTTG AACGTGATCT GTCCGACCTG GCTGACCTGC GAGAGTTGGT ACCGGTCTGG
AGTGACCTGA AGACCAAGCT TGAGATTGCA CGTCAGGCTG TGGCGTTCCA AGGGCAGGTA
GCAACTGCCG TTGCGAAGCT CGCGCTGAAC CCGGAGCAGA TTGCAGCTTA CAAGGCTCCC
CTTCAAACGC TCTTGGGCGA TGGCAACGCT TTGCTAGAGC CTGCAGGTGC GATAGCTCTC
GCAGGCGTTG GCCTGCGTGA AAGGCTTGCG TTGTTGCAGG AGCGTTCATC GCATCTGACT
TCGATTGGTC ATTTCACCGA AGCTGGTACT GATGAGACCG CACACCTTTC GTTGGATGAC
CTTAAGAAGA GTTGCGAGAC CGTAGTTTCT TCCGAGGCGC GACTCAAGGC ATGGTGTGCT
TGGAGGAAGG TGCGCGATGA GGCCTTCGCC GTTGGCCTCG CTCCAATTGT CCAGGCTATG
GAAAGGGGAG CGATTACCTC CGGAAAAGTC CGCCGCGTCT TCGAGGTGAA TTACGCACGC
TGGTGGCTGA ATACCACCGT AGACAACGAG GAGGTCATCC GGACGTTCGT TAGCGTAGAG
CACGAACAGC GTATTCGCGA TTTCCGCGCC CTGGATGACA AGTTCACCGA GCTGACAAAG
GATTGGCTTC GCGCTCGGCT GTGTGCAGAC CTACCAAGTC AGGACAGCGT AAGCCGCTCT
TCTGAGTGGG GTTTGCTGCG TCATGAAATG GGCAAGAAGA CCAAGCACAT CCCCTTGCGC
GAGCTGATGA CGCGAGCACC AGAGGCGCTC ACGAAGCTGA CACCTTGCTT GCTGATGAGC
CCGTTGTCCA TCGCCCAGTA CCTGCCGCCA GCTTCTACCC CGTTCGACCT GGTGATATTC
GATGAGGCCT CGCAGATTCC AGTGTGGGAT GCGATCGGGG CGATGGCACG AGGAAAACAG
GTCGTGATGG TAGGCGACCC GAAACAGTTG CCGCCCACCT CGTTCTTCGA TCGGGCTGAG
TCCACTGCCG AGGATGAAGA TGTCGAGGCG GATCTCGAAA GCATCCTGGA TGAATGCATC
AGCGCGAACC TGCCGATGCG TAATCTGAAT TGGCACTACC GTAGTCGCCA CGAGAGCCTG
ATCGCATTCT CGAACCAGCG CTACTACGGC TCGAAGCTAG TGACCTTCCC GTCGCCATTC
ACGGCTGATA AGGCTGTGAA GCTGTGCCCA GTTGCTGGTG TCTACGACAA GGGCGGTTCA
CGTACCAACC TAATCGAAGC AAGAGCTCTG GTCGCCGACC TAGTCGCTCG CCTTCAATCG
TCGGCCTTCC GTGAGAGCCG TCGTACCGTG GGCGTCGTTA CGTTCAACGG TGAGCAGCAA
AAGCTCATCA TGGACATGCT GGATGAGGCA TGCCGGAAAG ACCCGTCGCT CGACTCGTAT
TTCGCTGAGT CTGAGCTCGA GCCTGTGTTC GTGAAGAACC TAGAAAGTGT CCAGGGCGAC
GAGCGAGACA TCATTTACTT CTCGACCACC TACGGGAAAG ATGCTGCCGG GGTTATGTCA
ATGAACTTTG GCCCTATGAA TCGTCCAGGT GGCGAGCGTC GACTAAACGT TGCGATCACG
CGGGCTCGCC AAGAGTTGGT GCTGTTCTCG ACTCTGCGCC CAGAGCACAT TGACCTTGCC
CGGACGCAAG CGGTCGGGGT ACGTGACCTT AAGCACTTCC TCGAGTTTGC CGAGCGTGGG
CCACGAGCCT TGGCAGAGGC TAATTTTGGC AGCGTGGGTG GATTCGACAG CCCGTTCGAA
GAGGCGGTGG CTGCTGCCCT GGCCAAGAAG GGCTGGCAAG TTCACACCCA GATTGGTGTG
TCATCCTTCC GAGTCGACCT AGGCGTCGTC CACCCTGACG CTCCAGGGCG TTTCCTCGCC
GGCGTCGAGT GCGATGGGGC TACCTACCAC CGCAGTGCGA CTGCGCGTGA TCGCGACAAA
CTGCGGGAAT TTGTACTGCG GGGGCTTGGC TGGGAAATCG TGCGGATCTG GTCGACCGAC
TGGTGGGTTG ATGCCGTAGG GACGGCGGAA AAGGTTCATC AGCATTTGAC GGAGCTTCTC
TCTGAGTCGA GAGCCAAGCA AGCGGTTATC GATGCTGCGC ATGAAGCGGA GCGCCTGAAG
GTCGATGCAG CGATGGCTGA TGTCATTGAG GTAGTGGATC AGCTTGCTGT TGTAGCTTCT
CCCACAATTG CCGTAGCAAA TGATCCGTCT GGTGCATTGC CTGAGTTGAA GTACGCCAGA
GCCGTTACGG CTCAAGCCAT TGAGGAAGTG GTCATTCCTT ATGTTCCGGT GGAGCACTTG
GTTTACAAAG AAGCAGACCC TACCGAGGCT GTCGAAGCAG TTGATCCAGA CCGATTTTTT
GAGGCGAGCT ATACAACCAC TTTGGAGCAG ATGATTGCCC ATGTAGTTGC AGAAGAGGGG
CCTGTACTCG ATACGGCGCT TGCACGGCGT ATCGCGCGCG CGCATGGCTG GGTCAGAACG
GGCTCACGCA TTCGTGATCG AGTCGATCAA ATAGCGCGGA CACGATTCCG ATTCCATGAA
GAAGAGCAGG CCGGAACCTT CTTCTGGCCT GATCACCTCG GTTCAGATTC GAATGTTGCC
TTCCGCAGGC CGGGTGATGA TGCAATTCGC CCGCTCGGAG AAATTTGCCT ACCCGAACTG
GGTGCATTGG TAGACGAAAT GACAAAACAC GGTCATGTTG GAGAGGGGTT GGTTTACGCG
GTGGCCAAAG AAGCTGGGGT CAGCAAGCTT GCCCACGCTG GGCGTCAGCG TATTGAAAAA
GCCATCCGGC GATTTGATGA GTGA
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| Protein sequence | MDDIVQPLKA QEEIPPKEVK ILATLVAKLN LADFQNAIPV IRELRIANET EDRFVNATLT
LTSDPEVFKP KVWRIDEVAA DSFRIIPGLD LVLDGPLLSR LTEAELSTFT FVFEADDKEA
ESGRKEVARI EQVVDLLPRN QWGGLRHIPD MTAAFVQPND PAVERLLKQT AELLRQSELS
SSLDGYEGGA KRAWQLASAV WSAVARMKLD YALPPASFEQ SGQKVRSPSQ IADTGLATCM
DLTLLFCAAL EQIGLNPVIV FTRGHAFAGL WMKAEEFTTA LIDDVTAVRK RVKLRELVLF
ETTLSTQNLV PTFSYAVERG EKQIAEDADS EFEMLLDIRR ARLQRIKPLA SAEAQIARIA
DEVSDDSPSL LVEDGAGIPD EIHEVVVEDL SKLDPADRLG RWQRKLLDLS LRNNLLNFKM
AKRALKLESP DPGALEDILA SGQSLKLLTR PDLMDGADPR ERALYEQRER EDVRRRHAED
ALKRREVFVA LTSNEMDVRL TELYRGARTA LQEGGSNTLF LAIGFLSWTR EDRAGQKYKA
PLVLVPVTLE RKSARSGFTM VLHDDEPRFN PTLIEMLRQD FELGLGSLEH ELPRDDSGLD
IAGIWNKVGH AIKDIPGWEL SEDVVLSMFS FAKYLMWKDL AENAEHLRQS PVVQHLLDTP
RDSFVSDTPF PEAESLDRDY GPTDVFCPLP SDSSQLSAVM AAAKGKDFVL IGPPGTGKSQ
TISNMIAQSI AQGRRVLFVS EKIAALDVVY RRLREIGLGE FCLELHSSKA RKTDVLAQLQ
SAWEAKGQLD SAAWEVEAQR LATLRDSLNI YVERLHRRHR NGYSIYDAIG TVTSGGDEAV
APVGWASPDT HDQKAMLELR ELGDRLEVNA QAVGYSLLAG NALSAVGQAE WSPHWQQQFV
QAARDVLPVV LDVQRAADRF VELAGLPVTE YTPTALEGLS VLSQALPAAA GQDWRFALRP
DARSISQRLS DGCAWVEQHR ALNVKLSPLW SSRVMADAKQ GIELLQQRRT TFGELSPAWP
ESVTDVLAQA VALLGQIVEL KQQLSATYGD TIESLDIDLL LREWKEAEEA FWPKSWFGKR
RIAGLLAPSQ TTAGEADHGK DLATWAEIRA VRRAIDELEP GHECVVVWQG SKSVAEQLST
SIKLQEAIRL QQADSDWIDD GLQLVEQGQL GDGLKEELRR LRTLTRLDSD MSALSDLGSS
TQQLWCGKDT NIELLTAALR FQAERRDIEE RGRLVDDHPE VQEGRCGALL KGDFDLLKQR
AAVERDLSDL ADLRELVPVW SDLKTKLEIA RQAVAFQGQV ATAVAKLALN PEQIAAYKAP
LQTLLGDGNA LLEPAGAIAL AGVGLRERLA LLQERSSHLT SIGHFTEAGT DETAHLSLDD
LKKSCETVVS SEARLKAWCA WRKVRDEAFA VGLAPIVQAM ERGAITSGKV RRVFEVNYAR
WWLNTTVDNE EVIRTFVSVE HEQRIRDFRA LDDKFTELTK DWLRARLCAD LPSQDSVSRS
SEWGLLRHEM GKKTKHIPLR ELMTRAPEAL TKLTPCLLMS PLSIAQYLPP ASTPFDLVIF
DEASQIPVWD AIGAMARGKQ VVMVGDPKQL PPTSFFDRAE STAEDEDVEA DLESILDECI
SANLPMRNLN WHYRSRHESL IAFSNQRYYG SKLVTFPSPF TADKAVKLCP VAGVYDKGGS
RTNLIEARAL VADLVARLQS SAFRESRRTV GVVTFNGEQQ KLIMDMLDEA CRKDPSLDSY
FAESELEPVF VKNLESVQGD ERDIIYFSTT YGKDAAGVMS MNFGPMNRPG GERRLNVAIT
RARQELVLFS TLRPEHIDLA RTQAVGVRDL KHFLEFAERG PRALAEANFG SVGGFDSPFE
EAVAAALAKK GWQVHTQIGV SSFRVDLGVV HPDAPGRFLA GVECDGATYH RSATARDRDK
LREFVLRGLG WEIVRIWSTD WWVDAVGTAE KVHQHLTELL SESRAKQAVI DAAHEAERLK
VDAAMADVIE VVDQLAVVAS PTIAVANDPS GALPELKYAR AVTAQAIEEV VIPYVPVEHL
VYKEADPTEA VEAVDPDRFF EASYTTTLEQ MIAHVVAEEG PVLDTALARR IARAHGWVRT
GSRIRDRVDQ IARTRFRFHE EEQAGTFFWP DHLGSDSNVA FRRPGDDAIR PLGEICLPEL
GALVDEMTKH GHVGEGLVYA VAKEAGVSKL AHAGRQRIEK AIRRFDE
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