Gene PP_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3640 
Symbol 
ID1046471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4135788 
End bp4136708 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID637147054 
ProductAraC family transcriptional regulator 
Protein accessionNP_745776 
Protein GI26990351 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.456213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGT CCAGCCCGCT TGTCGATTGG TTATTAGAAA GCCTGGAGCT CGATGCCAGC 
CTGTTTCATG TAGGCCGCTA TTGCGGCGGC TGGCATGCCA GTACCCAAGG CATGGGCCGG
GCCAGCTTTC ATCTGGTGGT GCAAGGCCAT TGCTGGCTGC ACATTGACGG CCAGCCGCAG
GCCATTTGCC TGGAGAAAGG TGATGCCGTG TTCCTGCTGC GTGACCTGGC CTATCGCTTG
TCCAGCGATC AGGACCCGGT CGACGCCTGT GCCCAGCCGC GCCAGGCCAT GCAGGCGCTG
GATAGCCAGG CCGCCGACGG CGTTGGCTTG GTCTGCGGCT TCTTCCATTT TCAGTCGGGC
CTCTGCTCGC TGATTGTCGA GGGTCTCGCT GACTGGATCT TGTTACGCGC TGAAGATCCC
AGCGGCAGCG CAGCGCGGGC GCTGTTCGGG CTGATCCTGG AAGAATGCCG GCGAGATGCT
GGGCCATCAC AGATGCTACT GGAACGGCTG ACGCACTTGT TGTTCCTGTA CGTGCTGCGC
CAGCAGGTGC ACGCAGGGCA ATCGCTGGGC GGGCTGGTCG CCCTCGCCCG CCAGCCGGCA
TTTGCCGGAT TGCTTGAGCA ATTGATCGAG CATCCGGGGC AAACCTGGAC CATGGAGAAC
ATGGCCGCTT GCACCGGGTT GTCACGGTCG GCTTTTTTCA AGCGTTTCAG CGAGCTGGCC
GGGCAGTCAC CGGGACAAGT GCTGCTGGCG CTGCGCATGC GCCATGCCAG CCAGTTGCTG
CAGGCGGGGC ATACCGTTGA GCAGGTAGGC GCGCAGGTGG GGTATCAGTC GGTGGCCGCA
TTCACCAGGG CGTTCGCCAA GGCAGTGGGG GTGCAGCCGG GGGCGTATCG CAGGCAGCAT
GACGGGCGCG GGCATGCCTG A
 
Protein sequence
MISSSPLVDW LLESLELDAS LFHVGRYCGG WHASTQGMGR ASFHLVVQGH CWLHIDGQPQ 
AICLEKGDAV FLLRDLAYRL SSDQDPVDAC AQPRQAMQAL DSQAADGVGL VCGFFHFQSG
LCSLIVEGLA DWILLRAEDP SGSAARALFG LILEECRRDA GPSQMLLERL THLLFLYVLR
QQVHAGQSLG GLVALARQPA FAGLLEQLIE HPGQTWTMEN MAACTGLSRS AFFKRFSELA
GQSPGQVLLA LRMRHASQLL QAGHTVEQVG AQVGYQSVAA FTRAFAKAVG VQPGAYRRQH
DGRGHA