Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3640 |
Symbol | |
ID | 1046471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4135788 |
End bp | 4136708 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147054 |
Product | AraC family transcriptional regulator |
Protein accession | NP_745776 |
Protein GI | 26990351 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.456213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCGT CCAGCCCGCT TGTCGATTGG TTATTAGAAA GCCTGGAGCT CGATGCCAGC CTGTTTCATG TAGGCCGCTA TTGCGGCGGC TGGCATGCCA GTACCCAAGG CATGGGCCGG GCCAGCTTTC ATCTGGTGGT GCAAGGCCAT TGCTGGCTGC ACATTGACGG CCAGCCGCAG GCCATTTGCC TGGAGAAAGG TGATGCCGTG TTCCTGCTGC GTGACCTGGC CTATCGCTTG TCCAGCGATC AGGACCCGGT CGACGCCTGT GCCCAGCCGC GCCAGGCCAT GCAGGCGCTG GATAGCCAGG CCGCCGACGG CGTTGGCTTG GTCTGCGGCT TCTTCCATTT TCAGTCGGGC CTCTGCTCGC TGATTGTCGA GGGTCTCGCT GACTGGATCT TGTTACGCGC TGAAGATCCC AGCGGCAGCG CAGCGCGGGC GCTGTTCGGG CTGATCCTGG AAGAATGCCG GCGAGATGCT GGGCCATCAC AGATGCTACT GGAACGGCTG ACGCACTTGT TGTTCCTGTA CGTGCTGCGC CAGCAGGTGC ACGCAGGGCA ATCGCTGGGC GGGCTGGTCG CCCTCGCCCG CCAGCCGGCA TTTGCCGGAT TGCTTGAGCA ATTGATCGAG CATCCGGGGC AAACCTGGAC CATGGAGAAC ATGGCCGCTT GCACCGGGTT GTCACGGTCG GCTTTTTTCA AGCGTTTCAG CGAGCTGGCC GGGCAGTCAC CGGGACAAGT GCTGCTGGCG CTGCGCATGC GCCATGCCAG CCAGTTGCTG CAGGCGGGGC ATACCGTTGA GCAGGTAGGC GCGCAGGTGG GGTATCAGTC GGTGGCCGCA TTCACCAGGG CGTTCGCCAA GGCAGTGGGG GTGCAGCCGG GGGCGTATCG CAGGCAGCAT GACGGGCGCG GGCATGCCTG A
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Protein sequence | MISSSPLVDW LLESLELDAS LFHVGRYCGG WHASTQGMGR ASFHLVVQGH CWLHIDGQPQ AICLEKGDAV FLLRDLAYRL SSDQDPVDAC AQPRQAMQAL DSQAADGVGL VCGFFHFQSG LCSLIVEGLA DWILLRAEDP SGSAARALFG LILEECRRDA GPSQMLLERL THLLFLYVLR QQVHAGQSLG GLVALARQPA FAGLLEQLIE HPGQTWTMEN MAACTGLSRS AFFKRFSELA GQSPGQVLLA LRMRHASQLL QAGHTVEQVG AQVGYQSVAA FTRAFAKAVG VQPGAYRRQH DGRGHA
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