| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3622 |
|---|
| Symbol | |
|---|
| ID | 1046460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4117307 |
|---|
| End bp | 4119562 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637147036 |
|---|
| Product | isoquinoline 1-oxidoreductase, beta subunit, putative |
|---|
| Protein accession | NP_745758 |
|---|
| Protein GI | 26990333 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.522423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC CAGTCGATAC ACCCGCCGAA CTGCTCAGGC TGCAGCGGGG CGAAACGGTC
AACCTGTCAC GTCGGCGCTT TCTTGCCGGC ACCGCAGTCG GTGCCCTGGT GCTAGGTTTC
GGCCTGCCCA TGGGCTCGGC CCGCGTGCAG GCAGCAGCCG CCGCTGCGGC AACTGCGGAA
CGCGGCACCC AGGTGCCTGC ATTTCTGGAG ATTCGCCCGG ACGGCACGGT GCGCCTGCTG
AGCCCCTTTA TGGAAGGCGG GCAAGGCCCT TTCACCGCCA TGGCGCAGAT TGTGGGTGAA
GAGCTGGATG TCGACCCGGC CCATTTCGTG GTCGATAGCG CACCACCGGG CGAAGCCTAC
GTGGTGATGG AGAACGGCAT GCGCATCACC GGTGGCAGCA TGTCGGTGCG CATGAGCTAC
CCCACCATGC GCCGTCTGGG CGCGCTCGCC CGGGGCATGC TGCTGCAGGC GGGCGCCGAA
CACCTGGGTG TACCGGTCGA TGAGCTTTCT ACCACACCGG GTAACGTAGT ACATACCACG
ACCGGACGTT CCGTACCCTA CGGTGAGCTG GCCGGTCGCG CCATGGACCT GCCGGTGCCC
GACCCGGCCA GCGTCAAGCT GCGCGACCCC AGCCAGTTTC GCTGGATTGG AAAGCCCGTA
CGCCGCCTGG ATGCCTACGA CAAGTCCACC GGCAAGGCCC AGTACTGCAT CGACATCAAG
GTCGACGGCA TGCTCCACGC TGCCGTGCAG CATGCACCGC GCCTGGGCAT GACGGTTGGC
AGCCTGCGCA ACGAAGACCA GATCAAGGCC ATGAAAGGCG TACATTCTGT GCATCAGCTG
CCAGGCGCCG TGGCTGTGGT CGCCGAGCGC TGGTGGCACG CCAAGCGTGC AGTGGAGGCG
ATTCAGGTGG ACTGGAAAGA ACCGGCTGCC GACAGCAAAG TGCGACCGAT GCCGGCCGAT
TTTTCCAGCG ACGCCTGGCG CGAACACCTC GCGACGGTGC AAGGGCCGTC CCGTGATGAA
GAGAACGAAG GGGATATTGC CGGCGCCTTG GCCAACGCCA AGACCAAGGT CGAGGCCAGC
TACCACAACC AGTACCTGAA CCATGCCCAG CTGGAGCCAC CGTCCGCCCT CGCCCGCTTC
AACCCGGACG GCAGCCTCGA CGTCTGGCTG CCCAACCAGG CCCCGGACAT GTTCCGTGAC
GACATTGCCA GACGCACTGG CCTGGAGCCT GCACAAATCA ACCTGCACTC GCCGCTGCTG
GGCGGCTTCT TTGGCCGCCA CTTCCTGTAC GACTCTGCCA ACCCCTACCC GCAGGCCATT
GCCCTGGCCA AAGCGGTTGG CCGGCCGGTG AAGCTTATCT GGAGTCGCGA AGAGGAGTTC
TTGCGCGATG TACTGCGCCC CGTCGCAGTG GTGAAGTTCC GCGCCGGGCT GGACGCAGAC
GGTATGCCAG TGGCGCTCGA GGCGGTCAGC GCCACCGAGG GCCCAACCGA GGCCCTTGCT
GGAAAACAAG GGGAGAAGAT CGACCCGACC GCGCTTGAGG GGCTGTCAGG CAAGTCCTAC
GCCATCGCCA ACAAGCGCAT TGCCCAGATC TACGTCAAAG GCCCGGCCAT GCTTGGTTAC
TGGCGCTCGG TAGGTAACTC GCTGAACGAC TTCTTCTACG AATCATTCCT GGACGAACTG
GCGGACAAAG GTGGCAAGGA CCCGTTTGAA CTGCGCCTGC ACCTGCTGCG CGACAACCCG
AGACTGACCA ACCTGCTGAA CGCAGTGGCC GACTTGTCCG GCGGCTGGAA GCGCGGACCG
TTCACCGCCG AGGACGGCAG CAAGCGCGCA CGCGGCGTGG CCATGGCCTC ACCGTTCGGC
TCGGAGGCTG CGGTCATTGC CGAGGTTTCG ATCGACAACG GCCAGGTCAG GGTGCACGAC
ATCTGGCAAG CCATCGACCC GGGCAGCATC GTCAACCCGG CGATCATCGA GCATCAGGTC
AACGGCGCCG TCGCCCTGGG CCTGTCGCAG ACGCTGGTGG AAGAAGCGGT GTACGTGGAT
GGCAAGCCGC GCGCACGCAA TTACGACCTG TACCCGATCC TGCCGCCTTC GCGGATGGCG
CGGGTGCATG TGCGCATCAT CGAAAGCGGG GCGAAGATGG GCGGCATCGG CGAACCACCG
CTGCCCGCCG TGGCCCCGGC GGTGGCCAAC GCGGTCGCGC AGCTCACTGG CCAGCGCGTG
CGCAGTTTGC CATTGAGCCG CCACACCTTC AGCTGA
|
|---|
| Protein sequence | MNTPVDTPAE LLRLQRGETV NLSRRRFLAG TAVGALVLGF GLPMGSARVQ AAAAAAATAE
RGTQVPAFLE IRPDGTVRLL SPFMEGGQGP FTAMAQIVGE ELDVDPAHFV VDSAPPGEAY
VVMENGMRIT GGSMSVRMSY PTMRRLGALA RGMLLQAGAE HLGVPVDELS TTPGNVVHTT
TGRSVPYGEL AGRAMDLPVP DPASVKLRDP SQFRWIGKPV RRLDAYDKST GKAQYCIDIK
VDGMLHAAVQ HAPRLGMTVG SLRNEDQIKA MKGVHSVHQL PGAVAVVAER WWHAKRAVEA
IQVDWKEPAA DSKVRPMPAD FSSDAWREHL ATVQGPSRDE ENEGDIAGAL ANAKTKVEAS
YHNQYLNHAQ LEPPSALARF NPDGSLDVWL PNQAPDMFRD DIARRTGLEP AQINLHSPLL
GGFFGRHFLY DSANPYPQAI ALAKAVGRPV KLIWSREEEF LRDVLRPVAV VKFRAGLDAD
GMPVALEAVS ATEGPTEALA GKQGEKIDPT ALEGLSGKSY AIANKRIAQI YVKGPAMLGY
WRSVGNSLND FFYESFLDEL ADKGGKDPFE LRLHLLRDNP RLTNLLNAVA DLSGGWKRGP
FTAEDGSKRA RGVAMASPFG SEAAVIAEVS IDNGQVRVHD IWQAIDPGSI VNPAIIEHQV
NGAVALGLSQ TLVEEAVYVD GKPRARNYDL YPILPPSRMA RVHVRIIESG AKMGGIGEPP
LPAVAPAVAN AVAQLTGQRV RSLPLSRHTF S
|
|---|
| |