Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3592 |
Symbol | |
ID | 1046364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4082052 |
End bp | 4082975 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147006 |
Product | RpiR family transcriptional regulator |
Protein accession | NP_745728 |
Protein GI | 26990303 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAA ACATTCATTT TCTTCCCAAG CCTCACCCCT GGAGCCGCAG CATGAGCCAA CTGATCAAGC AACGCCTGGA AAACAGCCTC GAAGGGGCCG CTGCCTCGGG TCGCAAGATC GCCACCTACA TGCTTGCCAA CCTGCACGAA CTGCCGTTCC AGACCTCGGC CAGCATTGCC GCCAAGCTGG GCGTCAGCGA ATCCAGCGTC GGGCGCTACT GTCGCTCACT GGGTTATGCC CACCTCAAGG CGCTTAAGCA AGACCTGCAG AACGATCTGG GCGATGGCCC GTGGCTGGTG GGTGATCGCT TGCAAGATTA CCGCCAGAAC CAGGACGCCA GCGACAACGC CGGCAGCCTG GAGCTGGAAA TCGCCGCCCT GGTGCGCGTA CACGAATACC GCCAGAGCCC CGCCTGGCAC AACGTGGCGC AACGCCTGGC GAGCAAGCCG CGGGTGTTCA TCGCCGGCTT CCAGACCGAG CGCGGCATCG CCATGTGCAT GAGCCACCTG CTGCAATACC TGCGCGATGG CGTGCAACTG GTCGACATCA GCGCCGGGCA CTTCGGCGAA GTGCTGCTGG GCCGTGCCGA AGACAGCGCC CTGGTGGTGT TCGAGGCGCG CCGTTATTCC CGCCATGCCC TGATGCTGTG CCAGAAGGCG CGCGAGGCTG GCATTGCGGT CACCCTGGTG ACCGACACCT TCTGTGACTG GGCGGATGCC AATGCCGACG AGGTGTTCCG CATCCCCACC GAGTTCAACC TGTTCTGGGA ATCCACCTCG ACGATGCTGT CGTGGGTGCA TCTGATGGTC AACGAGGTCT GCAAGAAGCT CGGACCGGAT GTTGAAAAAC GCTTGGAAGC AACTGCCGCT CTACATAACG AATTCGTCGG CTACACCTCG TGGTCGACGG GCAAACAACA ATAG
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Protein sequence | MTENIHFLPK PHPWSRSMSQ LIKQRLENSL EGAAASGRKI ATYMLANLHE LPFQTSASIA AKLGVSESSV GRYCRSLGYA HLKALKQDLQ NDLGDGPWLV GDRLQDYRQN QDASDNAGSL ELEIAALVRV HEYRQSPAWH NVAQRLASKP RVFIAGFQTE RGIAMCMSHL LQYLRDGVQL VDISAGHFGE VLLGRAEDSA LVVFEARRYS RHALMLCQKA REAGIAVTLV TDTFCDWADA NADEVFRIPT EFNLFWESTS TMLSWVHLMV NEVCKKLGPD VEKRLEATAA LHNEFVGYTS WSTGKQQ
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