| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3569 |
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| Symbol | |
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| ID | 1045587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4047447 |
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| End bp | 4049864 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637146984 |
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| Product | quinate dehydrogenase (pyrroloquinoline-quinone), putative |
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| Protein accession | NP_745706 |
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| Protein GI | 26990281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CACCGCGCGC CTCTGGCGCC ACAAACTTCA TCCTGGTCGG CCTGGGCGTG
ATCATCGCCC TGCTCGGCCT CCTCCTCGCT GCCGGCGGCG TCAAGCTCGC CGGTCTGGGC
GGTTCCTGGT ACTTCCTGAT CGGCGGCTTG GCCATGGCCA TCGCCGGTGT CCTCATTGCT
CGCCGCAAGA AGGCGGGCGC CTGGCTGTAT GCCGTGTTCC TGGTCGGTAC TGCCATCTGG
GCACTGATCG ATGCGGGCCT GGTGTTCTGG CCGCTGTTCT CGCGCCTGTT CATGTTCGGC
GCAATCGGCA TGGTCGTGGC GCTGGTCTAC CCGCTGCTGG CGCGTGCCAA CGGCGCCAGC
GCCGGCCGCG GTGCCTACGG CGTCGCCGGG GTAATGGCCG TGGTACTGGT GGTCGCGGTC
GGCAACATGT TCGTTGCTCA CCCAAGCGTC GCGCCCACCG GCAAAGGCCC GGGCATGACC
CCGGTCGAAA CCGGCAAGGA ACAGAAAGAC TGGGCCCACT ACGGCAACAC CGAAGGTGGC
AGCCGCTTCG CCGCGCTTGA CCAGATCAAC CGGGACAACG TCAACAAGCT GAAAGTGGCC
TGGACCTACC AAACCGGCGA CGTTGCAATC AGTGACGGCA ACGGTGCCGA AGACCAGCTC
ACCCCGCTGC AGATCGGCAG CAAGGTGTTC ATCTGCACCC CGCACAACAA CCTGATCGCA
CTCGATGCCG ACACCGGCAA AGAGTTGTGG AAGAACGAAA TCAACGCCCA GTCCAAGGTC
TGGCAGCGTT GCCGTGGCAT GGCCTACTTC GACGCCACTG CCGCCATCGC CCAGCCAACC
CAGCCGAACA GCTCGCCGAT CACCGGCGTT AGCGTAGCGG CCGGTGCCAA CTGCCAGCGT
CGCCTGCTGA CCAACACCAT CGACGGCCGC CTGATTGCCG TCGACGCCGA CACCGGCGAG
TTCTGCCAGG GCTTCGGCAA CAACGGCCAG GTCGACCTCA AGGCAGGCCT GGGTGATGTC
CCGGACTCCT ACTACCAGCT GTCCTCGGCA CCGCTGATGG CCGGCACTAC CGTAGTGGTC
GGCGGCCGTG TTGCCGACAA CGTCCAGACC GACATGCCAG GCGGCGTGAT CCGTGGTTTT
GACGTGATCA CCGGTGAAAT GCGCTGGGCC TTCGACCCGG GCAACCCGGA AGACCGCCAG
GCTCCGCAGG GCGACAAGAC CTACGTGCGC AGCACCCCGA ACAGCTGGGC ACCGATGTCC
TACGACCCGG CAATGAACAC CGTGTTCCTG CCGATGGGCT CGTCCTCCAC CGACATCTAC
GGCGTTGAGC GCAGCAAACT GGACCACACT TACGGCGCTT CGGTGCTGGC TTTGGACGCC
ACCACCGGCA ACCAGAAATG GGTGTTCCAG ACCGTGCACA ACGACCTCTG GGACTTCGAC
CTGCCCATGC AGCCAAGCCT GATCGACTTC ACCAAGGACG ACGGCCAGTC GGTGCCTGCG
GTGGTGATCG GCACCAAGGC CGGGCAGATC TACGTGCTCG ACCGCGCCAC TGGCAAGCCG
CTGACCCAGG TCGACGAAGT ACCGGTCAAG CCAAGCAACA TCCCGAACGA GCCGTACTCC
CCAACCCAGC CCAAGTCGGT GGGCATGCCA CAGATCGGCG CGCAGACCCT GACCGAATCG
GACATGTGGG GCGCCACCCC GTATGACCAG CTGCTATGCC GCATCGACTT CAAGAAGATG
CGCTACGACG GCCTGTACAC CGCGCCGGGT ACCGACCTGT CGCTGAGCTT CCCGGGTTCG
CTGGGTGGCA TGAACTGGGG CAGCATTTCT ACCGACCCGG TACATGGCTT CATCTTCGTC
AACGACATGC GTCTGGGCCT GTGGATCCAG ATGATCCCGT CGCAGAACAA AGGTGGCGCG
GCTTCCGGTG GCGAAGCACT GAACACTGGC ATGGGCGCGG TACCGCTCAA GGGCACCCCG
TATGCCGTGA ACAAGAACCG CTTCCTGTCG GTCGCCGGCA TTCCATGCCA GGCACCGCCG
TTTGGCACCC TGACCGCCAT CGACATGAAG ACCCGCCAGG TGGCCTGGCA GGTGCCGGTA
GGCACCGTTG AAGACACCGG CCCGCTCGGC ATCCGCATGC ACCTGCCGAT CAAGATCGGC
CTGCCAACCC TTGGCGGCAC CCTGTCGACC CAAGGCGGCC TGGTGTTCAT CGCAGGTACC
CAGGACTTCT ACCTGCGCGC CTACGACAGC AGCAACGGTA ACGAAATCTG GAAGGCTCGC
CTGCCCGTGG GCAGCCAGGG CGGCCCGATG ACCTACGTCT CGCCGAAGAC CGGCAAGCAG
TACGTGGTGA TCACTGCTGG CGGCGCCCGC CAGTCGACTG ACCGTGGCGA CTATGTGATT
TCTTACGCTC TGCCGTAA
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| Protein sequence | MKETPRASGA TNFILVGLGV IIALLGLLLA AGGVKLAGLG GSWYFLIGGL AMAIAGVLIA
RRKKAGAWLY AVFLVGTAIW ALIDAGLVFW PLFSRLFMFG AIGMVVALVY PLLARANGAS
AGRGAYGVAG VMAVVLVVAV GNMFVAHPSV APTGKGPGMT PVETGKEQKD WAHYGNTEGG
SRFAALDQIN RDNVNKLKVA WTYQTGDVAI SDGNGAEDQL TPLQIGSKVF ICTPHNNLIA
LDADTGKELW KNEINAQSKV WQRCRGMAYF DATAAIAQPT QPNSSPITGV SVAAGANCQR
RLLTNTIDGR LIAVDADTGE FCQGFGNNGQ VDLKAGLGDV PDSYYQLSSA PLMAGTTVVV
GGRVADNVQT DMPGGVIRGF DVITGEMRWA FDPGNPEDRQ APQGDKTYVR STPNSWAPMS
YDPAMNTVFL PMGSSSTDIY GVERSKLDHT YGASVLALDA TTGNQKWVFQ TVHNDLWDFD
LPMQPSLIDF TKDDGQSVPA VVIGTKAGQI YVLDRATGKP LTQVDEVPVK PSNIPNEPYS
PTQPKSVGMP QIGAQTLTES DMWGATPYDQ LLCRIDFKKM RYDGLYTAPG TDLSLSFPGS
LGGMNWGSIS TDPVHGFIFV NDMRLGLWIQ MIPSQNKGGA ASGGEALNTG MGAVPLKGTP
YAVNKNRFLS VAGIPCQAPP FGTLTAIDMK TRQVAWQVPV GTVEDTGPLG IRMHLPIKIG
LPTLGGTLST QGGLVFIAGT QDFYLRAYDS SNGNEIWKAR LPVGSQGGPM TYVSPKTGKQ
YVVITAGGAR QSTDRGDYVI SYALP
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