Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3512 |
Symbol | |
ID | 1046412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3984193 |
End bp | 3984633 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637146927 |
Product | transmembrane pair domain protein |
Protein accession | NP_745649 |
Protein GI | 26990224 |
COG category | [S] Function unknown |
COG ID | [COG4125] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.118178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATGTG CAATGAAAAA CGTGTCTTTC ACCGAACGCC TGGTCCACGC CGTTGGCTAT GAAGTTTTTG CGGTACTGCT GTGTGCGCCG CTGCTGTCCT GGATCATGGG CAAGTCGCTG GCAACGGCGG GCACGCTGGC GGTGACCCTG TCGGTGATCG CCATGCTGTG GAACATGGTC TACAACGTAC TGGTCGATCG CTGGGTGCAA ACCGAACGCA TCAACTGGAA GGCCAGTACG CGTTTCGTGC ACGGTCTTGG CTTCGAAGCC GGCCTGGTGG TGTGGTGCCT GCCGGTGGCG GCTTGGATGC TGGAGATTTC GCTGCTGCAG GCATTCATGG TGGAGCTGGG CTTCTTCGTG ATCATCCTGC CCTACACCGT GGTCTACAAC TGGGCGTTCG ACAAAGCCCG GCACCTGCTG GTGCAGCGGC GTGTGGCATG A
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Protein sequence | MECAMKNVSF TERLVHAVGY EVFAVLLCAP LLSWIMGKSL ATAGTLAVTL SVIAMLWNMV YNVLVDRWVQ TERINWKAST RFVHGLGFEA GLVVWCLPVA AWMLEISLLQ AFMVELGFFV IILPYTVVYN WAFDKARHLL VQRRVA
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