| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3373 |
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| Symbol | |
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| ID | 1047023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3817015 |
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| End bp | 3819378 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637146791 |
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| Product | surface antigen family protein |
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| Protein accession | NP_745513 |
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| Protein GI | 26990088 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.241276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACC CGCGCCTGTT GCTCTCCATC CTGCTGCTGA AAGCCACGTT GGCCCAGGCC
TCACCGTTCA GGATCGCCGA CATTCGCGTC AACGGCCTGC AGCGGGTTTC CGCTGGCAGT
GTGTTCGGTG CCTTGCCGCT GAACGTCGGC GACCAGGCTG ACGACCGCCG CCTGGTGGAC
TCGACGCGTT CCCTGTTCAA GACCGGGTTC TTCCAGGACA TCCAGTTGAG CCGCGATGGC
AATGTGCTGA TCATCAACGT GGTCGAGCGC CCGTCGGTGT CGAGCATCGA GATTGAAGGC
AACAAGGCGA TCAGCACCGA AGACCTGATG AAGGGCCTGA AGCAATCGGG CCTGGCCGAA
GGCGAGATCT TCCAGCGTGC CACCCTCGAA GGTGTGCGTA ACGAGCTGCA GCGCCAGTAC
GTGGCCCAAG GCCGCTACTC GGCCGAGGTC GACGCCGAGG TGGTGCCGCA GCCGCGCAAC
CGTGTGGCGC TGAAGATCAA GATCAACGAA GGCACCGTCG CCGCCATCCA GCACATCAAC
ATCGTTGGCA ACAACGTATT CGATGATGAG ACCCTGGGGC AGCTGTTCGA GCTGAAGACC
ACCAACTGGC TGTCGTTCTT CAAGAACGAC GACAAGTACG CCCGTGAAAA ACTCTCCGGT
GACCTGGAGC GCCTGCGTTC CTACTACCTG GACCGCGGCT ACATCAACAT GGACATCGCC
TCCACCCAGG TGTCCATCAC GCCGGACAAG AAGCACGTCT ACATCACCGT CAACATCAAC
GAAGGCGAGA AATACACCGT TCGCGACGTG AAGCTGTCCG GTGACCTCAA GGTGCCGGAA
GACCAGGTCA AGTCGCTGCT GCTGGTGCAG CCGGGGCAGG TATTCTCGCG CAAGGTGATG
ACCACCACGT CCGAGCTGAT CACCCGCCGG CTGGGTAACG AAGGCTACAC CTTCGCTAAC
GTCAACGGCG TGCCGCAACC CAACGACCAG GACCACACGG TCGACATCAT GTTCGTGGTC
GACCCGGGCA AGCGTGCCTA CGTCAACCGC ATCAACTACC GCGGCAACAC CAAGACCGAA
GACGAAGTGC TGCGTCGCGA AATGCGCCAG ATGGAAGGCG GCTGGGCGTC GACCTACCTG
ATCGACCAGT CCAAGACCCG TCTTGAGCGC CTGGGCTTCT TCAAGGAAGT CAACGTCGAG
ACCCCGCAGG TGCCTGGCAC CGACGACCAG GTCGACGTCA ACTACAGCGT CGAAGAGCAG
GCCTCCGGCT CGATCACCGC CAGCGTCGGT TTCGCCCAGA GCGCCGGCCT GATCCTGGGT
GGTTCGATCA GCCAGAGCAA CTTCCTCGGT ACCGGTAACA AGGTATCCAT CGGCCTGACC
CGTTCGGAAT ACCAGACCAA GTACAACTTC GGCTTCGTCG ATCCCTACTT CACCGCCGAC
GGTGTCAGCC TGGGCTACAA CCTGTTCTAC AACAGCACCG ACTACAGCGA TTACTACGAC
GATGGTGTTT CGTACTATGC AATCAACAGC TACGGCGCCG GGGTCAGCTT TGGCTACCCG
ATCAACGAAA CCTCGCGCCT GACCTACGGC CTGACCCTGC AGCACGACGA CATTTCGCCC
GGCACCTACA GCGCTGACGA GATCTACGAT TTCATCTCCC GCGAAGGCAA GAGCTTCAAC
AACCTCAAGG CGTCGATCGG TTGGTCGGAA TCTACCCTCA ACAAAGGCGT ACTGGCCACC
CGGGGCCACT CGCAGAGCCT GACGCTGATG GCTACCACCC CTGGCAGCGA CCTGTCGTTC
TACAAACTCG ACTACAACGG CCAGGCTTTC CTGCCGGTGA CCAGCAACAC CACGCTGCGC
CTGCACACCA ACCTGGGCTA CGGCAACGGC TATGGCTCCA CCGACGGCTT GCCGTTCTAT
GAAAGCTACA ACGCCGGTGG GCAGGGGTCG GTACGCGGGT TCAAGGACGG CACCCTCGGC
CCGCGCAGCA CACCGGCTAC CGGGGCCTAT TCCAACGCTG GGCAGGCTTA CTATTCCGAC
CGCGACACCG ATGTGCTGGG GGGCAATATC CTGATTACCG GCGGTGCCGA GTACCTGTTC
CCGCTGCCCT TCGTGAAGGA CCAGAGCCAA CTGCGCAGCT CGGTGTTCGT CGATGCCGGC
AACGTGTATG CCGACACCTG CTACCTGTCC ACCACCCAAG GCTGCGGCAG CGTCGACCTG
GCGCAGATGG CTGTGTCGCT GGGGGTTGGC GTGACCTGGT ACAGCCCGAT GGGGCCGCTG
AGTTTCAGCC TGGCGGCGCC ATTGAAAAAG CCGGATAACG CCGAAACCCA GGTGTTCCAG
TTCTCGTTAG GGCAGACCTT CTGA
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| Protein sequence | MNYPRLLLSI LLLKATLAQA SPFRIADIRV NGLQRVSAGS VFGALPLNVG DQADDRRLVD
STRSLFKTGF FQDIQLSRDG NVLIINVVER PSVSSIEIEG NKAISTEDLM KGLKQSGLAE
GEIFQRATLE GVRNELQRQY VAQGRYSAEV DAEVVPQPRN RVALKIKINE GTVAAIQHIN
IVGNNVFDDE TLGQLFELKT TNWLSFFKND DKYAREKLSG DLERLRSYYL DRGYINMDIA
STQVSITPDK KHVYITVNIN EGEKYTVRDV KLSGDLKVPE DQVKSLLLVQ PGQVFSRKVM
TTTSELITRR LGNEGYTFAN VNGVPQPNDQ DHTVDIMFVV DPGKRAYVNR INYRGNTKTE
DEVLRREMRQ MEGGWASTYL IDQSKTRLER LGFFKEVNVE TPQVPGTDDQ VDVNYSVEEQ
ASGSITASVG FAQSAGLILG GSISQSNFLG TGNKVSIGLT RSEYQTKYNF GFVDPYFTAD
GVSLGYNLFY NSTDYSDYYD DGVSYYAINS YGAGVSFGYP INETSRLTYG LTLQHDDISP
GTYSADEIYD FISREGKSFN NLKASIGWSE STLNKGVLAT RGHSQSLTLM ATTPGSDLSF
YKLDYNGQAF LPVTSNTTLR LHTNLGYGNG YGSTDGLPFY ESYNAGGQGS VRGFKDGTLG
PRSTPATGAY SNAGQAYYSD RDTDVLGGNI LITGGAEYLF PLPFVKDQSQ LRSSVFVDAG
NVYADTCYLS TTQGCGSVDL AQMAVSLGVG VTWYSPMGPL SFSLAAPLKK PDNAETQVFQ
FSLGQTF
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