Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3202 |
Symbol | |
ID | 1046849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3633600 |
End bp | 3636080 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146624 |
Product | transporter, putative |
Protein accession | NP_745346 |
Protein GI | 26989921 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.320198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAT CTGCGCCTTC CACCGGCCCG CTCGACGACT TCGACAGCGC GTCCGGCTCG CTGCTGGAAC GTGCGCTCTT CAACCACCGT GTGCTGGTGT TGCTGCTGTG CCTGGCGGCG ACCTTGCTGC TCGGCTGGCA GGCCTCGCGC CTGACCCTCA ATGCCAGCTT CGAGAAGATG ATCCCGCGCG ATCATCCGTT CATCCACAAC TACCTGGAGC ACCGCCAGGA ACTCGCCGGC CTGGGCAACG CGGTGCGCAT CGCCGTGGCC AATCCGCGCG GTAGCATCTA CGACAAGGAC TACCTGCACA GCCTGCAGCA GCTCAACGAC GCGGTATACC TGCTGCCTGG CGTCGACCGT GCGGCGATGA AGTCGCTGTG GACGCCGTCC ACCCGCTGGA CCGGAGTCAC CGAGGAGGGC CTGGAAGGTG GCCCGGTGGT GCCCGACGGC TACGATGGCG CTGCCGCTAG CCTGGAAGCG CTCAAGCGCA ACGTGGAACG CTCCAACGAG ATTGGTCAAC TGGTGGCCTT CGACCAGCGT TCGAGCATTG TCTACGTGCC GCTGCTGGAG AAGACCCCGG ACGGCCAGGC CCTGGACTAC ACGGCCTTCG CCCATGAGCT GGAAACCCTG CGCGAGCGCT TCCAGGCGCA GGGGGTGGAG ATCCACATCA CCGGTTTCGC CAAGGTCGTC GGCGACCTCA TGGACGGCCT GCGGCAGATC CTGCTGTTCT TTGCCGCCGC CATTGCCATC ACCGCCGCCG TGCTGTACTG GTACACCCGC TGTGTGCGCA GCACCGCGCT GGTGGTGGTG TGTTCGCTGG TGGCAGTGAT CTGGCAGCTC GGCCTGCTGC CGCTGCTGGG TTACGCGCTC GACCCGTATT CGGTGCTGGT ACCGTTCCTG GTGTTCGCCA TTGGCATGAG CCATGGCGCC CAGAAGATGA ACGGCATCAT GCAGGACATC GGCCGCGGTA TGCATCGCCT TGTGGCAGCG CGGTTCACCT TCCGCCGGTT ATTTCTGGCC GGGCTCACCG CGCTGCTCTG TGATGCGGTC GGTTTTGCCG TGCTCATGAT CATTCAGATA CAGGTGATCC AGGACCTGGC CGTTATCGCC AGCCTGGGCG TGGCGGTGCT GATCTTCACC AACCTGATTC TGCTGCCGGT GCTGCTCTCC TACGTGGGCG TCAGTGCCCG TGCGGCGCGG CGCAGCCTGC GCGCCGAAGA GGCCGAGGCC AGCGGGGCGG GCAAGCATGC GGTGTGGCGC TTCCTCGACC TGTTCACCCG CCGACGCTGG GCGGCGGCGT GCATCGCCGT CGCTGCGCTG ATGGCTGCCG GGGGCTACGC CGTGAGCCTG CACCTGAAGG TCGGCGACCT CGACGCCGGC GCTCCCGAGC TGCGCGCCGA TTCGCGCTAC AACCGCGACA ATGCCTTCGT CACCCGGCAC TACGGCGCCA GCAGCGATGT GTTCGCGGTG ATGGTGCGCA CCGCCCCCGG TGGCTGTTCG GCCTACGGCA CCTTGAAACA CGTGGATGAC CTGGACTGGC AACTGCGTGG CCTGCAGGGC GTGGACTCGA CAAACTCGTT GGCGCTGCTC AACCGCCGGG TGCTGGTCGG CCTCTCCGAA GGCAGCCCGA AGTGGTATGA CCTGGTCAAC AACCAGGCGA CCCTGAACAT GGTCACCGCC GGTGCCCCGC GCGGGCTGTA CAACGACGAC TGCAGCCTGC TGACGCTCTA TGCCTACCTG ACCGATCACA AGGCCGACAC CCTGGCGCGG GTGGTCGACA GCGTCCAGGC ATTTGCCCAG GCCAACGACA GCGAGCAGGC CAGCTTCCTC ATGGCTGCCG GCAGTGCAGG CATCGAGGCT GCCACCAACC AGGTGGTCAA GCAGGCCAAC CGCGACATGC TCTGGTGGGT CTACGGCGCG GTGATCGTGC TCTGCCTGGT GACCTTCCGC TCCTGGCGCG CGGTGCTCTG CGCGGTGCTG CCGCTGGTAC TCACCTCGAT CCTCTGCGAA GCGCTGATGG TGGCGCTGGG TATTGGCGTG AAGGTGGCGA CCCTGCCGGT GATCGCCCTT GGGGTCGGCA TCGGCGTGGA CTACGCGCTG TATGTGATGA GCATCGTGCT GGCCCAGCTG CGCCAAGGCG CGAGCCTGTC CCAGGCGTAT TACCGCGCGC TGCTGTTCAC CGGCAAGGTG GTCATGCTCA CCGGTATCAC CCTGGCCATC GGCGTTGGTA CCTGGATCTT CTCGCCGATC AAGTTCCAGG CCGACATGGG CGTGCTGCTG GCATTCATGT TCGTCTGGAA CATGGTCGGC GCATTGATCC TGCTGCCGGC GTTGGCCTAC TTCCTGTTAC CGCACCGCAA GGCCTGCACC GAGCAGCTGG CATTGCCGGC GCATGAACAC ACAAGGCGCG AGCGCAGCAG CGGGATGCTG GAGCAGGGCG CCAGTTTTCG CCCGCTGGAG GAGGTGAGCC ATGGTCGCTG A
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Protein sequence | MNSSAPSTGP LDDFDSASGS LLERALFNHR VLVLLLCLAA TLLLGWQASR LTLNASFEKM IPRDHPFIHN YLEHRQELAG LGNAVRIAVA NPRGSIYDKD YLHSLQQLND AVYLLPGVDR AAMKSLWTPS TRWTGVTEEG LEGGPVVPDG YDGAAASLEA LKRNVERSNE IGQLVAFDQR SSIVYVPLLE KTPDGQALDY TAFAHELETL RERFQAQGVE IHITGFAKVV GDLMDGLRQI LLFFAAAIAI TAAVLYWYTR CVRSTALVVV CSLVAVIWQL GLLPLLGYAL DPYSVLVPFL VFAIGMSHGA QKMNGIMQDI GRGMHRLVAA RFTFRRLFLA GLTALLCDAV GFAVLMIIQI QVIQDLAVIA SLGVAVLIFT NLILLPVLLS YVGVSARAAR RSLRAEEAEA SGAGKHAVWR FLDLFTRRRW AAACIAVAAL MAAGGYAVSL HLKVGDLDAG APELRADSRY NRDNAFVTRH YGASSDVFAV MVRTAPGGCS AYGTLKHVDD LDWQLRGLQG VDSTNSLALL NRRVLVGLSE GSPKWYDLVN NQATLNMVTA GAPRGLYNDD CSLLTLYAYL TDHKADTLAR VVDSVQAFAQ ANDSEQASFL MAAGSAGIEA ATNQVVKQAN RDMLWWVYGA VIVLCLVTFR SWRAVLCAVL PLVLTSILCE ALMVALGIGV KVATLPVIAL GVGIGVDYAL YVMSIVLAQL RQGASLSQAY YRALLFTGKV VMLTGITLAI GVGTWIFSPI KFQADMGVLL AFMFVWNMVG ALILLPALAY FLLPHRKACT EQLALPAHEH TRRERSSGML EQGASFRPLE EVSHGR
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