| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3196 |
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| Symbol | |
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| ID | 1046846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3625561 |
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| End bp | 3626499 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637146618 |
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| Product | nodulation protein d1 |
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| Protein accession | NP_745340 |
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| Protein GI | 26989915 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.763305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTC ACCACCTGGA CTTGAACCTG CTGGTTGCCC TGGACATCCT GCTCGAGGAG
CAAAACATCA CACGCGCCGC CGAGCGCCTG CACATGACTC AATCGGCTAC CAGTGGGGTG
CTGGGGCGTT TGCGAACGTT TTTCGAGGAT GAGTTGCTGG TGCAGGTCGG CCGCAAGATG
CAGCCCACTC CCTATGCTCT GGAACTGGCC AAGCCGGTAC GCGAGGTGCT GCTGACCATT
CGCGCCTCGA TAACGGCCAA GCCGGTGTTC GATCCGGCCG CCAGCAAGCG ACACTTCCGC
CTGGTGGCCT CGGACTACCT GATCAGTGTG GTATTCGCTC AGGTCATCCA GAAAATCCAT
CAGGAGGCGC CGCAGATTAC CTTCGAGATG ATCGGCCCAG GCGACAGTAG CGCCGAATTG
CTGATGCGCG GCGAGGTCGA CATGATGATC GTGCCCGAGC GCTATCTCAT CGAGGGCCAT
CCGGCGCAGC TGCTGTTCGA GGAAGATCAT GTCTGCGTGG TGTGGCGCGA CAACCCCGAG
GTGGGCGAGC ATCTGACACT TGAGCAGTAC ATGCAGATGG GCCACATCTC GGTAGGCTTT
GGCCGCAACC GTCACTTGAG CATCGAGGAC TGGTTCATGA ACCAGTACGG CTTCAATCGG
CGGCTGGAAG TCATCACCAA CGACTTCAAC ACCCTGCCCC AGTTGTTGGT GGGCACCGTA
CGGGTCGCCA CCATGCACCG CCGACTGGCC GAACTCTATG CCGGCTACCT GCCGCTGCGC
CTGTTGCCAC CGCCAGTGAA GATCCCGGTT ATGCGTGAAT TCATGCTGTG GCACCGCAGC
ATGGACGGCG ACCCCATGCA CAGATGGCTT CGCGAGCGCA TCAGCGATGT CATTCAGTGC
GCCAGCACGC AGCCAGATGC TCTGCGCGCC ACCGCCTGA
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| Protein sequence | MRFHHLDLNL LVALDILLEE QNITRAAERL HMTQSATSGV LGRLRTFFED ELLVQVGRKM
QPTPYALELA KPVREVLLTI RASITAKPVF DPAASKRHFR LVASDYLISV VFAQVIQKIH
QEAPQITFEM IGPGDSSAEL LMRGEVDMMI VPERYLIEGH PAQLLFEEDH VCVVWRDNPE
VGEHLTLEQY MQMGHISVGF GRNRHLSIED WFMNQYGFNR RLEVITNDFN TLPQLLVGTV
RVATMHRRLA ELYAGYLPLR LLPPPVKIPV MREFMLWHRS MDGDPMHRWL RERISDVIQC
ASTQPDALRA TA
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