Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3181 |
Symbol | |
ID | 1046829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3605808 |
End bp | 3606758 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146603 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_745325 |
Protein GI | 26989900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA TCGAGCGCTA CCTTCGCGCC GCCACCCGTG ACAACACCCG GCGCAGCTAC CAGGCCGCCA TCGAGCACTT CGAGAGCCAT TGGGGCGGCT TTCTCCCGGC CACCGCCGAG AGTATCGCCC GCTACCTGGC CGATCACGCC GACCAGCATG CAGTCAGTAC CCTGCGCCAA CGCCTGGCCG CGCTCAGCCA GTGGCACGTC GCCCAAGGCT TCCCCGATCC GACCAAGGCG CCATTGGTGC GTCAGGTGCT ACGCGGCATC CGCACCCTGC ACCCGACGCC ACCCAAACAG GCCGCCCCGC TGTTGCTGCA ACACCTGCAA ACCGCTGTGA CGTGTTTCGA AGAAGAAGCC CGACAAGCCC GCGAGCACCA TGATTTGGCA GCCCTGCGCC GGGCTCGCCG TGACAGCGCC TTGCTGTTGC TGGGTTTCTG GCGTGGATTT CGCGGCGATG AGCTGGCACG CCTGCGCATC GAACACATCC AGGCGCAAGC CGGTGTCGGC ATTACGCTTT TCCTGCCGCG CAGCAAGGGC GACCGCGAAG CCTTGGGCGT CCAGCACCGC ACCCCTGCCC TCAAGGCCTT GTGCCCTGTC ACTGCCTACC TGCAATGGCT TGAAGTCGCC GGTATTGCCC ATGGGCCGGT GTTCCGCAAA CTCGACCGCT GGGGCAACCT TGGCGACAAC GCGCTCAACA GCAACAGCCT GGTGGGCCTG CTGCGGCGCA TGCTGGAACG CGCCGGGGTG CCGGCGGCGC TGTATACCGG CCACTCGCTA CGGCGTGGCT TCGCCACCTG GGCCACGGCC AATGGTTGGG AACTGAAGTC GCTGATGAGC TATGTGGGCT GGAAAGACGC CAAGTCGGCG CTGCGCTACA TCGACTCGGC GCAGCGTTTT GGCGATCTGG CCGTGCTACC GGCCAGTCAG GTGCAACCGC TTATTCCTTG A
|
Protein sequence | MTDIERYLRA ATRDNTRRSY QAAIEHFESH WGGFLPATAE SIARYLADHA DQHAVSTLRQ RLAALSQWHV AQGFPDPTKA PLVRQVLRGI RTLHPTPPKQ AAPLLLQHLQ TAVTCFEEEA RQAREHHDLA ALRRARRDSA LLLLGFWRGF RGDELARLRI EHIQAQAGVG ITLFLPRSKG DREALGVQHR TPALKALCPV TAYLQWLEVA GIAHGPVFRK LDRWGNLGDN ALNSNSLVGL LRRMLERAGV PAALYTGHSL RRGFATWATA NGWELKSLMS YVGWKDAKSA LRYIDSAQRF GDLAVLPASQ VQPLIP
|
| |