Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3150 |
Symbol | |
ID | 1046797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3567441 |
End bp | 3569438 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146572 |
Product | hypothetical protein |
Protein accession | NP_745294 |
Protein GI | 26989869 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0821533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGGCGGC CAGCCCAGGC AACACTGAAC CCAGCATTCC ACGCCAAAAG TTGCTATCGT GCCGCCCTGA TTTCACCCGA GGTGCCGATG TTCTACCTGC CTTTGCCCAG CGACCAGGCC GACCGCCTCG CCAGCGCGGC CGTTACCGAG TTCTTCACCA CCGCCAGTGT TGTCGATGCC GCTACCGTTC TGTTCGTGCA AAACCTGCCA CGCCAGCCTG CCACCGCCTC GGCCGACGCG CAGGAGCGTC GTTTCGCCGA AATCGTGCGC ATCGCCAACG AAGTCGAAGG TGTCGCCCCC GGGCGCTTCC AGGCCCAGGT AGCACAGCAA TTCGATCGCG AAGCGTTCGC CATGGGCCTG GGCATGCTGG GCGAAAACGG CATTGCACTG CTGTCGGCCG AAGTGCAGTA CCAGGCGGAC GAATGGCTGG ATGACGAAGG CCAGTGGAAC TTCCAGTTCG CCGACCGCTA CCGCCAACGG GCCACGCCGC TGCACCCGGT GTACCTGCCG TCGCTGGCCA GTGACTTGAT GCTCAGCGAC CAGCAGAACC GCCTGCTGCG CGAATTCCTC AGTGGCATCG ACGAGTCTGT GGCTGTGCAA GGTTTCGCCG GCACCGGCAA GACCTTCCTG ATTCACCAGT TCGCCCGGCT GCTGGAGCCA CAGCGCACCT TGCTGCTGGC CTTGACTGAA GGCCAGTTGC GCGCGCTGCA GGCGCGGGTC AAGGACGCTG CCGCCTATAC CGCGCTGACC TTCGGCCAAC TGGCTGACGA GCTGCTCAAC CGTGACCTCA CCAGCAACGG CTGGCGATTG CGCGATCCGT ACCGCACCAA GCTGTCCTGG CGCCCCCAGG AAGCGCAAGT GGTGCGCTGG CTGTCCATCC CAGATATCGG CCCGCTCGCA GCGCGTGATG TGGTTGCCTT GTGTATCCGC GCCGTGCGCA CGTTCTGCCA CAGTGCCGAT ACCCAGCTTC AGCTGCACCA CTTGCCCTGG GCCGGGCCTG GCACCTCGCC GCTGGATCAG GAGGTGCTGC TGGAAAAGGC ACGCCTGTAC TGGCAAGAGC TGATTCGCCC GTCGGCGCGG GACATTCAGC TGCCGGTGCG TGACTACCAC CGGGTCAAGC TGCTGTCGCT GACCGAGCAT GTGATCGACA GCCGTTACAC TCATGTCATC GTCGACGAAG CCCACGAGCT GTCGGCACCG ATGCTGGCGG TACTCGATCG CAGTCCGCAG TCGATCATTA CCCTGGGTGA CGAACTGCAA AACCTCAACG GCCTCAGCCC GCACCATGGC AGCTTCATCC GGCAACGCTG CATCGACCAT TCACTGCGCG CCGGGCCGGC AATGGACAAT GTGCTCAACC CGTTGATCCA GGCGCACCCG GCCACGATCC AGGCGGCCTT CAGTGGCAGC GCCGAGCACT ACACCCGGGT CAGCTTCTTC GATACGGTGA TGGTGCCGGA ACAGCCCACG GCGCTTATCG TCGATGATGA ATGGGGCCTG TTTGGCTGGT TCCAGCGCCT CACGCATCAG GGGGTGCCGT TCTTGTTGCT GAAAAGCGCT CGCAAGGACT TTGAACTGTT CGTCGAGGAC TGCATCGAGC TGTACCGCTA CGGCACCCGG CCGCGCCACC CGATGCTGTT CCGCTATGCC AGCTGGCAGG CGCTGGAACA GGACAAGGGC GATGACAAAG CGTTCGTCGC CGTGGCCAAC ATGCTGCGCA AAGGCTACAC GCCGGAGCAC TTTGCCAAAG CCAAGAGCCG TTACCGCTGG GACAAGGCGC CGAAGCTGTT CCTGGGGCGA GTACGGGATG TGAAGAACAT GGAGTTTGCC CGGGTGATGG TGTCGCCGGA GCTGATGGTG GCGCCACAGG TGGCGGGTAA CCGCAATGAA CGGGCGCGTA TGCTGGCGGG GTTGTATACC GCCTGTTCGC GGGCGCGGCA TGAATTGATC GTGCCGGGGG GGATGCTGGA CTGGGTCAAG GACCAGGTTC GGGATTGA
|
Protein sequence | MRRPAQATLN PAFHAKSCYR AALISPEVPM FYLPLPSDQA DRLASAAVTE FFTTASVVDA ATVLFVQNLP RQPATASADA QERRFAEIVR IANEVEGVAP GRFQAQVAQQ FDREAFAMGL GMLGENGIAL LSAEVQYQAD EWLDDEGQWN FQFADRYRQR ATPLHPVYLP SLASDLMLSD QQNRLLREFL SGIDESVAVQ GFAGTGKTFL IHQFARLLEP QRTLLLALTE GQLRALQARV KDAAAYTALT FGQLADELLN RDLTSNGWRL RDPYRTKLSW RPQEAQVVRW LSIPDIGPLA ARDVVALCIR AVRTFCHSAD TQLQLHHLPW AGPGTSPLDQ EVLLEKARLY WQELIRPSAR DIQLPVRDYH RVKLLSLTEH VIDSRYTHVI VDEAHELSAP MLAVLDRSPQ SIITLGDELQ NLNGLSPHHG SFIRQRCIDH SLRAGPAMDN VLNPLIQAHP ATIQAAFSGS AEHYTRVSFF DTVMVPEQPT ALIVDDEWGL FGWFQRLTHQ GVPFLLLKSA RKDFELFVED CIELYRYGTR PRHPMLFRYA SWQALEQDKG DDKAFVAVAN MLRKGYTPEH FAKAKSRYRW DKAPKLFLGR VRDVKNMEFA RVMVSPELMV APQVAGNRNE RARMLAGLYT ACSRARHELI VPGGMLDWVK DQVRD
|
| |