Gene PP_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3118 
Symbol 
ID1043971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3526787 
End bp3528205 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content67% 
IMG OID637146540 
Producthypothetical protein 
Protein accessionNP_745262 
Protein GI26989837 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.617034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGG CCTGCATCCT GCTCCCGCAG CTTGCGCTGG ACACCGTCCT GCGTGAGCGT 
GACGACCCTG ACACGCCTTT GGTGCTGATT GGCGGGCCGA CCCAGCGTCG CGTGTTGCAG
GCAGTCAACC CGGCGGCCGC TGCACTGGGC CTGCGGGCCG GGCAAACCCT GACCGCAGCG
CGTGCCCTAG CCGATGGCTT CACCTGTGTC GAAGCCGACC CCAAACGCAT CGATCAGGTG
CAACAGCTGC TGGCGGCCTG GGCCTACCGC TTCAGTGCCC AGGTTAGCCT GCATTACCCT
CGGGCGTTGC TGCTGGAAGT GGGCTCCAGC CTGCAACTGT TCGGGCCCTG GCCCTTGTTC
GAGGCACGTC TGCGTCAGGA ACTGGCAGAA CTGGGCCTGC GTCAACGCAT TGTCCTGGCC
AGCAACCCGG TGGCTGCTCG CATGCTCGCC AATGGCCACG ATGGCCTGGC CGTGGGCGAT
GTCGACGCCA CCCGAGCGGC GCTGCTTGGC ATGCCCATCA CGCGCGTCGG CCTGCCGGCA
GAGGCGGCCG AAGCGTTTGC CCGCATGGGC TTGCACCAGC TGGGCCAGGT ATTGGCCTTG
CCGCGCGATA CCTTGGCCAG GCGCTTTGCG GCCCAGGTGC AGCTGCACCT CGACCAGTTG
CTCGGCCTGC GCAACCTGGG GCTGGATTTC TACCAGCCAC CGGACCGTTT CGAAACCCGG
CTGGAACTCA ATTTCGACGT CGAGTCGCAC CAGGCGCTGT TGTTCCCGCT GCGGCGCATG
CTCAACGACC TGGCTGCATT TCTGGCCGGG CGAGACTGTG GTGTGCAGCG CTTCTGCCTG
CATCTGGAGC ACGCCGAGGG GCCGGATACC CTGCTCAAGG TGGGTTTGCT GGCGGCCGAA
CGCGATGCTG CGATGCTGTT CGAGCTGGCC CGTGGGCGCC TTGAGCCGCT GCGCATACCC
GCACCGGTGC GCAACCTGCG GCTGGTTGCC GAAGACTTGC CACCCTTTGT GCCACAGCAT
CAGGCGTTGT TCGACCCGCG GGCGCAACAG GCGCAACCCT GGGCGCAATT GCGCGAGCGG
TTGCGCGCCC GCCTGGGGGA TGAGGCCGTC AAGGGGCTTG GCGCAGCCGC CGATCACCGC
CCCGAATGCG CCTGGCATTT GGCGGAGCAG GGTGCCCAAG GCAACATGCC GGTTGCACCG
GGCAGCCGCC CGGGGTGGCT GTTGTCGGCA CCGATCGCGC TGGATGACGC CGCCTACCAG
GTGCAGGGCT ATGCCGAACG CATCGAATCA GGTTGGTGGG ATGGCGGCGA TGTGCGTCGC
GACTACTACC GCATCGAAAC CCGTGACGGC CTGCGCGGCT GGGCCTACCG CGACCTGAGC
CAGGCCGGTC CGCTTTGGCT GCAGGGTTGG TTCGCATGA
 
Protein sequence
MLWACILLPQ LALDTVLRER DDPDTPLVLI GGPTQRRVLQ AVNPAAAALG LRAGQTLTAA 
RALADGFTCV EADPKRIDQV QQLLAAWAYR FSAQVSLHYP RALLLEVGSS LQLFGPWPLF
EARLRQELAE LGLRQRIVLA SNPVAARMLA NGHDGLAVGD VDATRAALLG MPITRVGLPA
EAAEAFARMG LHQLGQVLAL PRDTLARRFA AQVQLHLDQL LGLRNLGLDF YQPPDRFETR
LELNFDVESH QALLFPLRRM LNDLAAFLAG RDCGVQRFCL HLEHAEGPDT LLKVGLLAAE
RDAAMLFELA RGRLEPLRIP APVRNLRLVA EDLPPFVPQH QALFDPRAQQ AQPWAQLRER
LRARLGDEAV KGLGAAADHR PECAWHLAEQ GAQGNMPVAP GSRPGWLLSA PIALDDAAYQ
VQGYAERIES GWWDGGDVRR DYYRIETRDG LRGWAYRDLS QAGPLWLQGW FA