| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3069 |
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| Symbol | |
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| ID | 1043783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3450966 |
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| End bp | 3453443 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637146491 |
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| Product | outer membrane autotransporter |
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| Protein accession | NP_745213 |
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| Protein GI | 26989788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.27692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.553853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTTT TCCTGATGCG TCTACGCCTG ATGCTGACCC TGGGTTCGCT CCCGCTGCTG
GGCATGGCCT CGCCCGCTGC ACACGCGGCT TGTACCTTCT CACCCGGCCC GGGTAACGAC
ACCTACACCT GTGACAGCGG CACCGCACCC GCGTTGGTGG ACAGCAGCGG CGATAACCGC
CTGGTATTCC CGGCATCCGG TAGCGGCGCC ATTACCGGCG ACGTAACCTT CGGCGCCGGC
AAAGACAGCA TCGACATGGC CTCTGGCAGC GTCGGCGGGA ACGTCAACCA GGGCGCCGGC
ATCGATGACT TCGTCATGAG CGGCGGCGTC ATCGAAGGCA ACCTCAACCA GGGTGATGGC
CTGGACACCT TTCACATGAG CGGCGGCTGG ATCAAGGGCA CGTTCGACAG CGGCGACTAT
GCCGAAATGG ACGACGGACG TATCGGCAAC GTCAACATGC GGCTGGACGA GAACACCTTC
ATCATGCGTG GCGGCAGCGT CGACCGGAAC GTCATCACGG CCTTCGACAA GGACTACATC
GAAGTCTTCG AGGGCAACAT CGGTGGCAAC ATCAGCGTCA GCGGTGGCGA CGACCAGGTG
CTGGTGCACG GTGGCCAGGT TGGCGGCGAT GTGTTGCTGA GCACTGGCAA CGACCGCTTC
ACCTGGGACG GTGGCCGTAT TGGCGGGCGC GTGGATGCCG GGCCAGGTGA TGACACGGCA
CTGCTCAAAG GCCTTACGCC CGAGGTGCTG AGTATCACGT TGGACGGCGG CGAAGGTAAC
GACAGCCTGA CGTTCGATGC CAGCCAGCCG GCAGGCGGTG CCCACTATGT GAACTGGGAG
CGCGTGGCGC TGAACAACGG CAGCCGGCTG GCACTGGATG ACACGCTGGT ACTGGGCGAC
AGCAACAGCA GCACGGGCAG CCTCGCCCTC GACGCCAGCA GCCGCATCAC GTCACGCCAA
GGGGTAATCA CTGCGTTTGC CCCTGGCCAG CGCGCCGCAA TCAGCAACGC AGGCACACTT
GACCTCACCG CCGGCAATGA TGCCATGGGC CGCTTGCGCA TCGAGGGCGA TTACACCGGC
AACAACGGCA CCCTGCGCCT GAACAGCGTG CTGGCCGGCG ATGGCGCTGC TTCCGATCGC
CTGGTGGTCA GCCGCGGCGC CATCGCCGGC TCTACCCAGG TGCTCATCAA CAACCTCAAC
GGCGCAGGTG CGGCGACTGC CCAGAACGGC ATCCAGGTGG TCGAAGCCCG TAACGGCGCC
ACCAGCACGG CCACCGCCTT TGTACAGACC CAAAGGCTGT CGGCCGGTGC CTACGACTAT
CGGCTGTTCA AAGGGGGCGT TACTGCCGGC AGTGAAAACA GCTGGTACCT GCGCTCGACG
CTGGTTGCGC CACCCGCTCC AGCCCCTGTG CCGGCACCGG GCGAGCCGCC GGTGATCGCC
CCAGCCGTCA CCCCGCCCGT CGCTGCGCCA GCGCCCGGCC AGGCCGAGCT GCCGGCGCCG
GTGCAGGGCC AAAGCCTGCC GCTGTACCGC CCCGAGGTCC CGGTGTATGC CGCAGCGCCG
CGGGGGGCCG CGATCATCGC CCGCCAGGCA CTGGGCACCT TCCACCAACG CCAGGGCGAC
CAGCTGTTAT TGCAGGGTGA AAGCGCCCTC CCCGCCAGCT GGGGGCAAGC CTACGGCGGC
ACGCTGCGCC AGCAATGGAG CGGCACGGTC AGCCCGAGCC TGGATGGCGA CCTGTACGGT
TTCAAGGTGG GCCAGGACCT GTATGCCAAG GTTGGCGACA ACGGTTACCG CCAGCATGTT
GGTATCTACG TAAGCCATAG CCGCCTGGAC GCCGACGTCA AAGGGTTTGC CCTGGCCGTT
CACGACCGCA GCGTGGGCGA CCTGAAGCTC GATGGCGATA GCGTGGGCAC CTACTGGACG
CTGGTCGGGC CACAGGGCGC GTACCTGGAC GCGGTGTTGC AATACACCCG CCTGGATGGC
CGCGCCCGCT CCGAGCGTGG CGACACGCTG AACCTCGACG GCCACGCCTG GACAGCTTCA
CTGGAATCGG GCTACCCCAT CACCCTGTCC GAGCGCTGGC GCGTGGAACC GCAAGCTCAG
TTGATTGCGC AAAAGGTCGC GCTGGAAAGC GCCCGCGACA GCGTCTCGCG CATCAGTCAT
GACGCCCAGG TCGAGCTGAC CGGCCGTTTG GGCCTGCGCC TGGAGGGTGC GTTCACGGGG
AGCAGCGGGC GCCTGTTGCA GCCTTTTGCG CAGGTCAACC TGTGGCACGG CGACGGTGGG
CGCGACACCT TGACCTTCGA TGACGCTGAC AAGATCAAGA CCGATTACCG CTATACCTCA
GTGCAACTGG AAAGCGGTGT GGTAGCGCAG GTCAACGAAG CGCTGAGCCT GCATGGCGGC
GTGCAGTACA CCGCCAACCT GGACAGCCGC CAGCAGGAAG CCAGCGGCGT GAACCTGGGC
GTGCGCTGGC AGTTCTAG
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| Protein sequence | MEVFLMRLRL MLTLGSLPLL GMASPAAHAA CTFSPGPGND TYTCDSGTAP ALVDSSGDNR
LVFPASGSGA ITGDVTFGAG KDSIDMASGS VGGNVNQGAG IDDFVMSGGV IEGNLNQGDG
LDTFHMSGGW IKGTFDSGDY AEMDDGRIGN VNMRLDENTF IMRGGSVDRN VITAFDKDYI
EVFEGNIGGN ISVSGGDDQV LVHGGQVGGD VLLSTGNDRF TWDGGRIGGR VDAGPGDDTA
LLKGLTPEVL SITLDGGEGN DSLTFDASQP AGGAHYVNWE RVALNNGSRL ALDDTLVLGD
SNSSTGSLAL DASSRITSRQ GVITAFAPGQ RAAISNAGTL DLTAGNDAMG RLRIEGDYTG
NNGTLRLNSV LAGDGAASDR LVVSRGAIAG STQVLINNLN GAGAATAQNG IQVVEARNGA
TSTATAFVQT QRLSAGAYDY RLFKGGVTAG SENSWYLRST LVAPPAPAPV PAPGEPPVIA
PAVTPPVAAP APGQAELPAP VQGQSLPLYR PEVPVYAAAP RGAAIIARQA LGTFHQRQGD
QLLLQGESAL PASWGQAYGG TLRQQWSGTV SPSLDGDLYG FKVGQDLYAK VGDNGYRQHV
GIYVSHSRLD ADVKGFALAV HDRSVGDLKL DGDSVGTYWT LVGPQGAYLD AVLQYTRLDG
RARSERGDTL NLDGHAWTAS LESGYPITLS ERWRVEPQAQ LIAQKVALES ARDSVSRISH
DAQVELTGRL GLRLEGAFTG SSGRLLQPFA QVNLWHGDGG RDTLTFDDAD KIKTDYRYTS
VQLESGVVAQ VNEALSLHGG VQYTANLDSR QQEASGVNLG VRWQF
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