Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2987 |
Symbol | |
ID | 1043032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3385614 |
End bp | 3386177 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637146409 |
Product | hypothetical protein |
Protein accession | NP_745131 |
Protein GI | 26989706 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.080358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATGATT CGGCTATTCA TCATTGGTTT TTGCGGGTGG ATGGCTCGTC ATCGAGGTGT TACTATCGAT TTGATACAGA CAATACTACC CTTTCGCAGG CAGGTCACTA TCAAAATAGT ATGGACGTGA AAAATAGTTG CGATAACCCG TGCCCGATCG CCCGCAGCCT GGCAGTTGCC GGTGATGCCT GGAGCATATT GATCCTGCGT GATGCCCATG CCGGCCTTTC TCGCTTTGAC CAATTCAGGA AAAGCCTGGG AATTGCACCG ACAATGCTGA CCCGCCGGCT GGCGACACTG ACGGAGGAAG GATTACTGGA GAAGCGGCGC TACTCCGAGC ACCCGCCTAG GGAGGAGTAC CTGCTGACCG CTGCGGGTCG CGATTTTCTG CCTGTGCTGT TCATGATTGG TGCATGGGGC CGGCAATACC GAGGCGGTGG TAAGCTGACG CGCTTCTTCG ATGCGCAAAC AGGCACAGAA ATCAAAGCTG TCGCCGTGGA CGAGATTACG GGGGCGAAGA TCGGCACGCG CCCCCTGCGC ATTGTCACAC CTGAGGAAAG TTGA
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Protein sequence | MHDSAIHHWF LRVDGSSSRC YYRFDTDNTT LSQAGHYQNS MDVKNSCDNP CPIARSLAVA GDAWSILILR DAHAGLSRFD QFRKSLGIAP TMLTRRLATL TEEGLLEKRR YSEHPPREEY LLTAAGRDFL PVLFMIGAWG RQYRGGGKLT RFFDAQTGTE IKAVAVDEIT GAKIGTRPLR IVTPEES
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