Gene PP_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2930 
Symbol 
ID1042915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3332184 
End bp3333101 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID637146352 
ProductL-serine dehydratase, putative 
Protein accessionNP_745074 
Protein GI26989649 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC ACATTCATAC CCCCCTGATC GAGTCGCGCC CGCTGTCGTT GGCGGCCGGT 
CGTAATATCT GGCTCAAGCT CGACGCCCTG CAACCCTGCG GTTCGTTCAA ACTGCGCGGT
GTAGGCCACG CCTGCGAGGT ACACCACGCG CGTGGCGCCC GGCACTTTGT GTCCTCGTCA
GGTGGCAATG CCGGTTTGGC AGTCGCCTAT GCCGGACGCA AGCTGGGGGT GCCGGTGACC
GTGGTGATAC CCGAAACCAC CACCGAACGG GCCAAGCAGT TGCTGCACCT GGAAGACGCC
AAGGTGGTGG TGCAAGGCAG TTCCTGGCAA GAGGCCAACG CCCTGGCACA GACACTGGTA
GGCCCGAACG ATGCCTTCAT CCACCCATTC GACGACCCAC TGCTGTGGGC CGGGCATGCC
AGCCTGGTGG ATGAAGTGGC CGAGGCCGGC CTGAAGCCGG ACGCGGTGGT GTTGTCAGTC
GGCGGGGGCG GCTTGCTCAG TGGCGTGGTG GAGGGGCTCA AGCGCAATGG CTGGGGCGAT
GTGCCTGTGC TGGCGGTAGA AACCGAGGGC GCGGCGTCGC TGCATGCGGC CATGCAGGCT
GGGCATTCGG TGGAGCTGGA GCGCATCGCC TCGGTGGCGA CGTCGCTGGG GGCCAAGCGT
GTGGCTGATC AGGCGCTGAT GTGCGTGCAG CAGCATCCGG TGCACAGCCA TCTGGTCAGC
GATCGCGCAG CGCTGGAGGC CTGTGAGCGG TTCTTGCTGG ACCACCGTGT GCTGGTCGAG
CCCGCGTGCG GGGCGGCGTT GGCAGTGGCC TATGATGCCA AGGCTCTGGG CGCCTTGCGC
AATGTCCTGG TGGTGGTCTG TGGTGGCGCT ACCGCAACAC TGGAGCAGAT CCAGGCCTGG
CTGCAGCAGG CAGACTGA
 
Protein sequence
MTLHIHTPLI ESRPLSLAAG RNIWLKLDAL QPCGSFKLRG VGHACEVHHA RGARHFVSSS 
GGNAGLAVAY AGRKLGVPVT VVIPETTTER AKQLLHLEDA KVVVQGSSWQ EANALAQTLV
GPNDAFIHPF DDPLLWAGHA SLVDEVAEAG LKPDAVVLSV GGGGLLSGVV EGLKRNGWGD
VPVLAVETEG AASLHAAMQA GHSVELERIA SVATSLGAKR VADQALMCVQ QHPVHSHLVS
DRAALEACER FLLDHRVLVE PACGAALAVA YDAKALGALR NVLVVVCGGA TATLEQIQAW
LQQAD