| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2916 |
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| Symbol | ribE-2 |
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| ID | 1042834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3316165 |
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| End bp | 3316794 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637146338 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | NP_745060 |
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| Protein GI | 26989635 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.619819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACACCG GCATCGTCCA GGCCGTCCGC CCTCTGCTTG ATGTGACCAC CTACCCGGGC
CACAACCAGT TCACCATCGA CCTCACCCCG GAACTGCTCG ACGAGCTGAA AATCGGTGCC
AGCGTCAGTG TCGAAGGTAC CTGCCTGTCC GTGACCGAAA TCGACGGCAG CCAAGTCAGG
TTCGACGCCA TGACCGCTAC CCTCGAGCGC ACCAATCTGA GCAGCTTCAA GCCTGGCCGG
AGCGTGAACA TCGAACGTTC GGCGAAGATG AACGCCGAAG TCGGCGGCCA CCTGATGGCC
GGCCACATCG CCACCACCGC CGAGATCGTC GAGCTGTCGA TCAAGGAAAC CGGCGCCTTC
ATCAAGTTCC GCATGCCGCC GCAATGGGGC AAGTACGTGT TCCCGCGTGG TTTCATCGGG
GTCAATGGCT GCAGCCTGAC GGTCGCTGAT GTGGAGGACA ACGTGATCAC CATCAACCTG
ATCCCGGAAA CCCTGCGTCA GACCACCTTC GCCAGCTACC ACCCAGGTGA GCTGCTCAAC
ATCGAGGTCG ACCATCAGAC CATGGTGCTG GTCGATGTGG TAGAGCGCAC CATCAAAGGT
ACCCTGGCCC GCGAAAACCT GCTGCCCTGA
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| Protein sequence | MYTGIVQAVR PLLDVTTYPG HNQFTIDLTP ELLDELKIGA SVSVEGTCLS VTEIDGSQVR
FDAMTATLER TNLSSFKPGR SVNIERSAKM NAEVGGHLMA GHIATTAEIV ELSIKETGAF
IKFRMPPQWG KYVFPRGFIG VNGCSLTVAD VEDNVITINL IPETLRQTTF ASYHPGELLN
IEVDHQTMVL VDVVERTIKG TLARENLLP
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