Gene PP_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2836 
Symbol 
ID1042711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3237559 
End bp3238776 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID637146258 
Productfumarylacetoacetate hydrolase family protein 
Protein accessionNP_744980 
Protein GI26989555 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.46895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.986291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC GAACGAACGC CAATCAACCG CTGCCACTGA GCCATGATGC CAGCGTTTTC 
GACCGCGGCA GCTGGGTAGG GCGCGTCTGG TTGCCGGAGC AGGGGCCGGC GGTGGTGCTG
GTGAAAGCCG GCGCCGTCTA CGATATCAGC ACCCACGTGG CGACCGTCTC GGCGCTGCTG
GAAGTGGACG ATCCGGTGGC CTACCTGCGT GCCTTGCCGC TGGCCGAACC CTTGATTGCA
CTGCCGGCAT TGCTGGGCAA CAGCGATCCC ACACGGCGCA CCCCGCACCA GCCGTGGCTG
CTGGCGCCGA TCGACCTGCA AGCGGTGAAG GCCGCTGGTG TGACCTTCGC CACCAGCCTG
CTGGAGCGTG TGGTAGAAGA ACAGGCCAAG GGCGACCCGG CCAAGGCCGA CGCCATCCGT
GACACCCTGG CCAGCCGCAT CGGCGCCGAC CTGTCGCAGA TCGTGCCCGG CTCGGCTCAG
GCCGAAGCGC TGCGCAAGGT GCTGGTAGAG CAGGGCCTGT GGTCGCAGTA CCTGGAGGTG
GGTATCGGCC CGGATGCCGA AGTGTTCACC AAGGCCCAAC CGCTGTCCGC GGTTGGCCAC
GGCGCCGACA TCGGCATCCA CCCCAAGTCC AGCTGGAACA ACCCAGAGCC GGAAGTGGTG
CTGGCCGTGT CGAGCAATGG CAGCATCAAG GGCGCCATGC TCGGCAACGA CGTCAACCTG
CGCGACTTCG AAGGGCGTAG TGCGTTGCTG CTGTCCAAGG CCAAGGACAA CAACGCTTCC
ACTGCACTGG GCCCGCTGCT GCGGTTGTTC GACGAAAGCT TCGGCCTGGA CGATGTGCGT
GCTGCCGAGG TGGACCTGCG GGTGGAAGGC GAGGACGGCT TTATCCTCTC CGGGCGCAGT
TCCATGCGCC AGATCAGCCG TGACCCGCAA GACCTGGTGC AGCAAACCCT CAACGAAAAC
CACCAGTACC CTGACGGCCT GGTGCTGTTC CTCGGTACCC TGTTCGCCCC CAAGCAGGAC
CGCGATCAGC CGGGTAACGG CTTTACCCAC AAACCGGGAG ACGTGGTGAG CATCAGCAAC
CCGCAACTGG GTACCCTGTG CAACCGCGTG ACCACCAGCG ATCTGGCACC GCAGTGGGAC
TTCGGCCTGC GCGCGTTGAT CGACAACCTC GGCCGACGTG GCCTGCTGGA GGTCGCGGCC
ACCGCCCGCC CGCTTTGA
 
Protein sequence
MTDRTNANQP LPLSHDASVF DRGSWVGRVW LPEQGPAVVL VKAGAVYDIS THVATVSALL 
EVDDPVAYLR ALPLAEPLIA LPALLGNSDP TRRTPHQPWL LAPIDLQAVK AAGVTFATSL
LERVVEEQAK GDPAKADAIR DTLASRIGAD LSQIVPGSAQ AEALRKVLVE QGLWSQYLEV
GIGPDAEVFT KAQPLSAVGH GADIGIHPKS SWNNPEPEVV LAVSSNGSIK GAMLGNDVNL
RDFEGRSALL LSKAKDNNAS TALGPLLRLF DESFGLDDVR AAEVDLRVEG EDGFILSGRS
SMRQISRDPQ DLVQQTLNEN HQYPDGLVLF LGTLFAPKQD RDQPGNGFTH KPGDVVSISN
PQLGTLCNRV TTSDLAPQWD FGLRALIDNL GRRGLLEVAA TARPL