Gene PP_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2816 
Symbol 
ID1042695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3212273 
End bp3212839 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID637146238 
Producttranscriptional regulator NfxB, putative 
Protein accessionNP_744960 
Protein GI26989535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT CAGACTTTCC ACCTTCAACG CTTCCCGCCA AGCTGGTGAA TGCCCTGTAT 
GCCGCTGCCG CCTTGCGACC CAGAGCGTCC ATGGGCGAGC TGGCCGTGTT GGCGGGCATC
AGCCGGGCAA CCCTGCACCG TTACTGCGGT ACGAGAGACA ACCTCGATAG CCAGCTCGAA
CAGCACGCCA AAGACACGCT CATGCATATC CTCGACAACA GCGGCACGCT GGCCTGCCGC
GAGCCCCTGG CCGCGTTGCG TCAGCTGATT CATGCGCACC TGGCCCAGGG TGAACTGATC
GCTTTCCTGG CCTCCCGTTA CCCTGTGCAC ATGAGCGTGC AGCACGACCT GCGGTTTTAT
CTGGAAAGGC TCGATGCGTT GTTTGCCAGC GGCCAGCGAC AAGGCGTATT TCGAGCGGAT
GTCACCGCGG CGTTGCTGAC CGAGATGTTC GTATCGCTGT TGCATGGCAT GGTCGACGCC
CGCCAACGGG GGCGCGCGCC AAGAGAGTGT GCAACGGTGC TGGAGAGCGC GTTTCTACAG
GGCATTGCCA CGCGGGCGCC CTATTGA
 
Protein sequence
MTPSDFPPST LPAKLVNALY AAAALRPRAS MGELAVLAGI SRATLHRYCG TRDNLDSQLE 
QHAKDTLMHI LDNSGTLACR EPLAALRQLI HAHLAQGELI AFLASRYPVH MSVQHDLRFY
LERLDALFAS GQRQGVFRAD VTAALLTEMF VSLLHGMVDA RQRGRAPREC ATVLESAFLQ
GIATRAPY