| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2780 |
|---|
| Symbol | |
|---|
| ID | 1042431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3165566 |
|---|
| End bp | 3166864 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637146202 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
|---|
| Protein accession | NP_744924 |
|---|
| Protein GI | 26989499 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCA CACGGATCGT GATCACGGGC ATGGGCGCCG TCACCGGCTT CGGTTTCGAG
TGGCAGTCCA TGTGGCAAAG AATGTTGGCC GGCGAGCATT GCATTCGGCC ATGGCAACCG
GAAGGCGTCG AGGCGGGTGC GTTCCCCGTG CGTTACGCAG CGCCCGTGGA TATGGGCTTG
ATGCCGGCAC ACTTGAAAGA CCATCCGGCC TGGGGATTGT CGCTGGAAAA ACGCACCCGC
TTTGGCTGGA TCGCGGCCAC CCAAGCCATT GCCGATAGTG GTCTGAGCCC CGAACAGTTG
CGTGGCGCGG CGGTATTGTC AGCGTCCGGC GCACCTGCTC ATCGTTTGCA GGACATGCTG
CTCAGCCTGG CGGATAACCC GGCGCAGGCG CCGTCCTGGG CTCAATTGAT GGCGCGACAG
GCGCAGGTCG ATCCTGACAG TTCACTGCGT CAGAGCAACG ACCGCCTTGC GCGGGTGATT
GCCGATGGCA TCGGCAGTGA AGGCCCGGTG ATCAATGTCA GCAGCGCCTG CGCGGGAGCG
TCCCAGGCCA TCGGCAATGC ATTCCAGATG ATCCGTCGCG GCGAGGTCGA GCTGGCCATT
GCCGGGGGCG CCGATTCGGT GCTTAGCCTG GACACCATGA CCGCGCTGTA TCTGCTCGGC
GCCGCCAGCA GCGAACAGCG TTGGGGCACC GAACTGTGTC GGCCGTTCGA TCGCCATCGC
AGTGGCTTGA TTGCGGGTGA GGGCGGTGGT TTTGTCGTGC TCGAAACCCT CGAACGGGCG
CTCGCCCGAG GGGCAACGCC GTACGCCGAA GTGCTGGGTT TCGGCAGCAG CCTGGATGCC
TACAAAATCA CCGCACCCGA CCCGCAGGGC CGGGGCGCGG TGCTGGCGAT GCAGGCGGCC
CTGACGGATG CCGGGCTGGC GCCGCAACAG GTCGATCTGA TCAATGCCCA CGGTACGTCG
ACACCCCTCA ACGATGCCGC CGAAACCCTG GCGATCAAGA CCCTGTTCGC CGAGCGCGAA
CATTATCGGC GGTTGCTGGT GACGGCCAAC AAATCCCAGT TCGGCCACCT GATTGCGGCC
GCCGGAGCAC CGGAGTTCAT GCTCACGGCC CTGGCCTGCC GGGATGATCG GGTCACGCCG
ACCCTGAACT TGCAGGATGC CGACGAACAA TGCGACCTCG ACTACTGCGC CCACCAAGCG
GTCAAGCGCA AGGTCGACGT TGCCCTGAGC AACTCCTTCG GTTTCGGCGG CCTCAACACT
TCACTGGCGC TTGGCAAGTA CCGGGAGGCG CCGCGATGA
|
|---|
| Protein sequence | MSPTRIVITG MGAVTGFGFE WQSMWQRMLA GEHCIRPWQP EGVEAGAFPV RYAAPVDMGL
MPAHLKDHPA WGLSLEKRTR FGWIAATQAI ADSGLSPEQL RGAAVLSASG APAHRLQDML
LSLADNPAQA PSWAQLMARQ AQVDPDSSLR QSNDRLARVI ADGIGSEGPV INVSSACAGA
SQAIGNAFQM IRRGEVELAI AGGADSVLSL DTMTALYLLG AASSEQRWGT ELCRPFDRHR
SGLIAGEGGG FVVLETLERA LARGATPYAE VLGFGSSLDA YKITAPDPQG RGAVLAMQAA
LTDAGLAPQQ VDLINAHGTS TPLNDAAETL AIKTLFAERE HYRRLLVTAN KSQFGHLIAA
AGAPEFMLTA LACRDDRVTP TLNLQDADEQ CDLDYCAHQA VKRKVDVALS NSFGFGGLNT
SLALGKYREA PR
|
|---|
| |