Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2674 |
Symbol | qedH |
ID | 1046117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3061563 |
End bp | 3063458 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146096 |
Product | quinoprotein ethanol dehydrogenase |
Protein accession | NP_744818 |
Protein GI | 26989393 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATAA GATCGCTACC CGCCCTTTCC CCGCTGGCCC TGAGCGTGCG CGTCCTGCTG ATGGCCGGTA GCCTGGCCCT GGGCAATGTG GCAACAGCGG CCAGCACACC CGCTGCACCT GCCGGCAAGA ACGTCACCTG GGAAGACATC GCCAATGACC ACCTGACCAC CCAGGACGTG CTGCAGTACG GCATGGGCAC CAATGCCCAG CGCTGGAGCC CGCTGGCCCA GGTCAATGAC AAGAACGTGT TCAAGCTGAC CCCGGCCTGG TCCTACTCCT TCGGCGACGA GAAGCAGCGC GGCCAGGAAT CCCAGGCCAT CGTCAGCGAT GGCGTGGTCT ACGTCACCGG TTCGTACTCA CGGGTATTCG CCCTCGATGC CAAGACCGGC AAACGCCTGT GGACCTACAA CCACCGCCTG CCCGACAACA TTCGTCCCTG CTGCGACGTG GTCAACCGCG GGGCGGCGAT CTACGGCGAC AAGATCTACT TTGGCACCCT CGATGCGCGT GTCATCGCCC TCGACAAGCG CACCGGCAAA GTGGTGTGGA ACAAGAAGTT CGGCGACCAC AGCGCCGGCT ACACCATGAC CGGTGCGCCA GTGCTGATCA AGGACAAGAC CAGCGGCAAG GTGCTGCTGA TCCACGGCAG CTCCGGCGAT GAATTCGGCG TGGTCGGCCA GCTGTTCGCG CGCGACCCGG ACACCGGTGA AGAAGTGTGG ATGCGGCCCT TCGTGGAGGG CCACATGGGC CGCCTGAACG GCAAGGACAG CACCCCGACC GGTGACGTCA AGGCGCCGTC CTGGCCAGAC GACCCTACCA CCGAAACCGG CAAGGTCGAA GCCTGGAGCC ACGGCGGCGG TGCCCCTTGG CAAAGCGCGA GCTTCGACCC CGAAACCAAC ACCATCATTG TCGGCGCTGG CAACCCCGGC CCTTGGAATA CCTGGGCGCG CACGTCGAAG GACGGCAACC CGCATGACTT CGACAGCCTG TACACCTCCG GCCAGGTCGG CGTCGACCCG AGCACCGGCG AGGTCAAGTG GTTCTACCAG CACACCCCCA ACGATGCCTG GGACTTCTCC GGCAACAACG AGCTGGTGCT GTTCGACTAC AAGGACAAGA ACGGCAACGT GGTCAAGGCC ACCGCCCACG CCGACCGCAA CGGTTTCTTC TATGTGGTTG ACCGCAACAA CGGCAAGCTG CAAAACGCTT TCCCCTTCGT CGACAACATC ACCTGGGCCA GCCATATCGA CCTGAAGACC GGGCGCCCGG TGGAAAACCC CGGCCAACGC CCGGCCAAGC CGCTGCCGGG TGAAACCAAG GGCAAGCCGG TGGAAGTCTC GCCACCGTTC CTGGGCGGCA AGAACTGGAA CCCCATGGCC TACAGCCAGG ACACCGGGCT GTTCTACATC CCCGGCAACC AGTGGAAAGA GGAATACTGG ACCGAGGAAG TGAACTACAA GAAGGGCTCG GCTTATCTGG GCATGGGCTT CCGTATCAAG CGCATGTACG ACGACCACGT CGGCACGTTG CGCGCCATGG ACCCGACCAC CGGCAAGCTG GTGTGGGAAC ACAAGGAACA CCTGCCGTTA TGGGCCGGTG TGTTGGCGAC CAAGGGCAAC CTGGTGTTCA CCGGCACGGG CGACGGCTTC TTCAAGGCCT TCGACGCCAA GACGGGCAAA GAGCTGTGGA AGTTCCAGAC CGGCAGCGGC ATCGTCTCGC CGCCCATCAC CTGGGAGCAG GACGGCGAGC AGTACATCGG CGTGACCGTG GGCTACGGCG GTGCAGTACC GCTGTGGGGC GGCGACATGG CCGAGCTGAC CAAACCGGTG GCTCAGGGTG GTTCGTTCTG GGTGTTCAAG ATCCCGAGCT GGGACAACAA GACTGCACAA CGTTGA
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Protein sequence | MTIRSLPALS PLALSVRVLL MAGSLALGNV ATAASTPAAP AGKNVTWEDI ANDHLTTQDV LQYGMGTNAQ RWSPLAQVND KNVFKLTPAW SYSFGDEKQR GQESQAIVSD GVVYVTGSYS RVFALDAKTG KRLWTYNHRL PDNIRPCCDV VNRGAAIYGD KIYFGTLDAR VIALDKRTGK VVWNKKFGDH SAGYTMTGAP VLIKDKTSGK VLLIHGSSGD EFGVVGQLFA RDPDTGEEVW MRPFVEGHMG RLNGKDSTPT GDVKAPSWPD DPTTETGKVE AWSHGGGAPW QSASFDPETN TIIVGAGNPG PWNTWARTSK DGNPHDFDSL YTSGQVGVDP STGEVKWFYQ HTPNDAWDFS GNNELVLFDY KDKNGNVVKA TAHADRNGFF YVVDRNNGKL QNAFPFVDNI TWASHIDLKT GRPVENPGQR PAKPLPGETK GKPVEVSPPF LGGKNWNPMA YSQDTGLFYI PGNQWKEEYW TEEVNYKKGS AYLGMGFRIK RMYDDHVGTL RAMDPTTGKL VWEHKEHLPL WAGVLATKGN LVFTGTGDGF FKAFDAKTGK ELWKFQTGSG IVSPPITWEQ DGEQYIGVTV GYGGAVPLWG GDMAELTKPV AQGGSFWVFK IPSWDNKTAQ R
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