| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2248 |
|---|
| Symbol | |
|---|
| ID | 1045138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2563899 |
|---|
| End bp | 2564963 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145667 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744397 |
|---|
| Protein GI | 26988972 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3949] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.284315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.730008 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC AGCTGAAGAT CGCCGGCGCA TTTGTCGGCG TGATCGTGGG GGCGGGGTTC
GCTTCAGGGC GGGAACTGTT GTTGTTCTTT GTCGATTTCG GTGTGTGGGG CTTGGCTGGC
GCGCTGGTCA GCGCCGCCTT GTTCACCTTT CTCGGCATGG CGCTGGCGGG GCTGGGCAAT
CGTCAGCAGG CCACCTCGCA CAAGGATGTG ATTTTGGCCA TCTGCGGCCG TCACCTGGGC
ATGTTCGTCG ACTGGTTGAT CACCTTTTTC ATGTTCGCCG TCACCGTGGT CATGCTGGCT
GGCGGTGGAG CATTGCTGGA GCAGCAGTTC GGCATCCCGG CCTTGACCGG CAGCGTGCTG
GTGACGCTGG TGGTGGTCGG TATCGTGTGC CTGGACGTGC GCAAGATGAT GCTTGCAATT
GGCGCCATCA CACCCTTGCT GATCCTGGTG GCTTCGGCGA TAGCGCTGTA TGCCGTGATC
ACCCGCGAGC AGAGCTTTGC TGCGCTCGAT CAGGTGGCCA GCCAGCAACA GGCCGGCACC
CGCCATTGGC TGCTGGGTGC GTTCTTGTAT GTGTCGTATA ACATCGTCGC GGGTGCGCCG
ATCCTGGCTA TTCTGGGCGG TTCGGCCAAG GGTGAGAAAG CCGCGGTGTG GGGAGGCCTG
CTCGGTGGCG CTGCGCTAGG CGGCCTGATG CTGGTGATGA GTGCCGGGCT GCTGTCGCGC
CTGGACAGTG TGGCCGACCA GCCGATGCCG ATGCTGTCGA TTGCCAACGA AGTGTCACCA
CTGCTGGGGC TGGTGATGTG CCTGATCATC TTCGGCATGA TCGTCAACAC CGCGGTGGGC
ACGCTGTTTT CCTTCCTCTC GCGGCTGTTG CCGGCGGGCA CGACGAAGTT CCGCTGGGGC
TCGGTGGTGA CCGGGGTGGT GGCGCTCGGC TGTAGCCTGG TGGGGTTCAT CAGCCTGGTG
GGTGAGGTGT ACCCGTTCTT CGGTTACCTG GGCTTTGTGC TGATGACGGC GGTATTGCTG
GCCTGGGTAC GGCGGGGCAG GGCTGCGAAG GCGGTGGCGG CATAA
|
|---|
| Protein sequence | MQEQLKIAGA FVGVIVGAGF ASGRELLLFF VDFGVWGLAG ALVSAALFTF LGMALAGLGN
RQQATSHKDV ILAICGRHLG MFVDWLITFF MFAVTVVMLA GGGALLEQQF GIPALTGSVL
VTLVVVGIVC LDVRKMMLAI GAITPLLILV ASAIALYAVI TREQSFAALD QVASQQQAGT
RHWLLGAFLY VSYNIVAGAP ILAILGGSAK GEKAAVWGGL LGGAALGGLM LVMSAGLLSR
LDSVADQPMP MLSIANEVSP LLGLVMCLII FGMIVNTAVG TLFSFLSRLL PAGTTKFRWG
SVVTGVVALG CSLVGFISLV GEVYPFFGYL GFVLMTAVLL AWVRRGRAAK AVAA
|
|---|
| |